Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04206 and BL00354
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_04206___ysdC.1.5803.seq
# -bsequence pep-align/BL00354___ysdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04206___ysdC-BL00354___ysdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04206___ysdC-BL00354___ysdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04206___ysdC
# 2: BL00354___ysdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 309/361 (85.6%)
# Similarity: 342/361 (94.7%)
# Gaps: 0/361 ( 0.0%)
# Score: 1645.0
#
#
#=======================================
BSNT_04206___ 1 MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSL 50
||||||||.|||:||||||||.||:|.|||||||||||||||||||||||
BL00354___ysd 1 MAKLDETLMMLKELTDAKGIPANEKEPRQVMKSYIEPFADEVTTDRLGSL 50
BSNT_04206___ 51 IAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLA 100
||||||..:||||||||||||||||||:|.|:|::|||||||||:|||||
BL00354___ysd 51 IAKKTGQADGPKIMIAGHLDEVGFMVTRIDDRGYLRFQTVGGWWSQVMLA 100
BSNT_04206___ 101 QRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEA 150
||||:|||||:|||:|||||||:||.|||||||:||||||||||||||||
BL00354___ysd 101 QRVTVVTKKGDITGIIGSKPPHVLSQEARKKSVDIKDMFIDIGASSREEA 150
BSNT_04206___ 151 LEWGILPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT 200
:|||:||||.:||:||||||||||.|||||||||||||||||||:||:..
BL00354___ysd 151 MEWGVLPGDQVVPYFEFTVMNNEKMLLAKAWDNRIGCAIAIDVLKNLKGA 200
BSNT_04206___ 201 DHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEK 250
||||:|||||||||||||||||||||||:||||||||||||||||||:||
BL00354___ysd 201 DHPNVVYGVGTVQEEVGLRGAKTAAHTIKPDIAFGVDVGIAGDTPGITEK 250
BSNT_04206___ 251 EAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGT 300
|:.||||||||||:|||||||||||||.|...|:||||||||||::||||
BL00354___ysd 251 ESASKMGKGPQIILYDASMVSHKGLRDFVTNVADEAGIPYQFDALSGGGT 300
BSNT_04206___ 301 DSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350
|||:|||||||||||||||||||||||||||||||||:||||||||||:|
BL00354___ysd 301 DSGSIHLTANGVPALSITIATRYIHTHAAMLHRDDYEHAVKLITEVIKRL 350
BSNT_04206___ 351 DRKTVDEITYQ 361
|::||..||:.
BL00354___ysd 351 DKETVQNITFD 361
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