Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04204 and BL00353
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_04204.1.5803.seq
# -bsequence pep-align/BL00353___abnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04204-BL00353___abnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04204-BL00353___abnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04204
# 2: BL00353___abnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 135/320 (42.2%)
# Similarity: 157/320 (49.1%)
# Gaps: 146/320 (45.6%)
# Score: 763.0
#
#
#=======================================
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 1 MKNVLRKMSLAALIFGLLLSFSMPESGKAAFWDTKGDNFIHDPSIIKEGN 50
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 51 TWYTFGTGLGTGLRVIKSTDGRNWSAAPSIFPTPLSWWKMYVPNHEPHQW 100
BSNT_04204 1 ---------------------------------------------MIRST 5
:||||
BL00353___abn 101 APDISYYNGRYWLYYSVSSFGSNTSAIGLASTDRISSGQWRDDGLVIRST 150
BSNT_04204 6 SSNNYNAIDPELTFDKDGNPWLAFGSFWSGIKLTKLDKNTMKPTGSLYSI 55
|.:.:|||||:|..||||||||:|||||||||||:|||||||||||||||
BL00353___abn 151 SGDQFNAIDPDLVIDKDGNPWLSFGSFWSGIKLTRLDKNTMKPTGSLYSI 200
BSNT_04204 56 AARPNNGGALEAPTLTYQNGYYYLMVSFDKCCDGVNSTYKIAYGRSKNIT 105
|:|||||||:|||.:||::|||||.||||.||.||:||||||||||.:||
BL00353___abn 201 ASRPNNGGAVEAPNITYKDGYYYLFVSFDSCCKGVDSTYKIAYGRSTSIT 250
BSNT_04204 106 GPYLDKSGKSMLEGGGTILDSGNDQWKGPGGQDIVNGNILVRHAYDANNN 155
|||.|||||:|:.|||||||||||:|||||.||::|.:|||||||||.:|
BL00353___abn 251 GPYYDKSGKNMMNGGGTILDSGNDRWKGPGHQDVLNNSILVRHAYDALDN 300
BSNT_04204 156 GIPKLLINDLNW-SSGWPSY 174
|:.|||||||.| |.|||:|
BL00353___abn 301 GVSKLLINDLYWDSQGWPTY 320
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