Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04204 and BL00353
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_04204.1.5803.seq
# -bsequence dna-align/BL00353___abnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04204-BL00353___abnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04204-BL00353___abnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04204
# 2: BL00353___abnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 970
# Identity: 381/970 (39.3%)
# Similarity: 381/970 (39.3%)
# Gaps: 452/970 (46.6%)
# Score: 1253.5
#
#
#=======================================
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 1 ATGAAAAATGTGTTGCGGAAAATGTCTTTGGCGGCCTTGATATTCGGACT 50
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 51 GCTGCTGTCTTTTTCGATGCCTGAATCAGGCAAAGCGGCGTTTTGGGACA 100
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 101 CAAAAGGGGACAATTTCATCCATGACCCTTCTATCATTAAAGAGGGAAAT 150
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 151 ACATGGTATACATTTGGAACAGGGCTCGGCACAGGGCTGCGTGTCATTAA 200
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 201 GTCAACAGACGGGAGAAACTGGAGTGCTGCCCCGAGTATTTTTCCAACTC 250
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 251 CATTGTCATGGTGGAAGATGTACGTACCAAATCATGAACCGCATCAATGG 300
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 301 GCACCGGATATCAGCTACTATAACGGCCGGTATTGGCTGTACTACTCGGT 350
BSNT_04204 0 -------------------------------------------------- 0
BL00353___abn 351 TTCGTCTTTCGGTTCAAACACATCAGCGATAGGGCTCGCATCGACAGACC 400
BSNT_04204 1 -----------------------------------GTGATTCGTTCGACA 15
||.||..|.||||||
BL00353___abn 401 GGATTTCATCCGGCCAATGGCGGGATGACGGGCTGGTCATCAGGTCGACA 450
BSNT_04204 16 AGCTCAAATAATTATAACGCCATTGATCCGGAGCT-GACATTCGACAAGG 64
..|....||.|.|.|||.||||||||.||.||.|| |.|||| |||||.|
BL00353___abn 451 TCCGGCGATCAGTTTAATGCCATTGACCCTGATCTGGTCATT-GACAAAG 499
BSNT_04204 65 ATGGCAACCCGTGGCTCGCGTTCGGCTCGTTTTGGAGCGGCATTAAGCTG 114
|.||.|||||.||||||.|.|||||.||.||.||||||||||||||||||
BL00353___abn 500 ACGGAAACCCCTGGCTCTCATTCGGTTCCTTCTGGAGCGGCATTAAGCTG 549
BSNT_04204 115 ACCAAGCTTGATAAGAATACGATGAAGCCTACAGGCTCGCTCTATTCGAT 164
||.|.|||||||||.||.||||||||.||.||.||....||.||||||||
BL00353___abn 550 ACAAGGCTTGATAAAAACACGATGAAACCGACGGGAAGCCTGTATTCGAT 599
BSNT_04204 165 TGCAGCTAGACCGAATAATGGAGGTGCCTTAGAAGCTCCTACTCTTACGT 214
.||..|.||.||||||||.|||||.||..|.|||||.||.|...||||.|
BL00353___abn 600 CGCCTCAAGGCCGAATAACGGAGGAGCGGTTGAAGCCCCGAACATTACCT 649
BSNT_04204 215 ATCAAA-ATGGATATTACTATTTAATGGTTTCATTTGATAAATGCTGTGA 263
| |||| |.||.||.||.||.|||.|.||.||.|||||.|..|||||..|
BL00353___abn 650 A-CAAAGACGGCTACTATTACTTATTTGTCTCGTTTGACAGCTGCTGCAA 698
BSNT_04204 264 CGGAGTAAACAGTACGTACAAAATTGCTTACGGAAGATCCAAAAACATTA 313
.||.||..||||.||.||.|||||.||.||.||..|.||.|..|.|||||
BL00353___abn 699 AGGGGTGGACAGCACATATAAAATAGCCTATGGCCGTTCAACGAGCATTA 748
BSNT_04204 314 CAGGCCCTTATCTTGATAAAAGCGGAAAAAGCATGCTTGAA-GGCGGAGG 362
|.||.||.|||..||||||||||||.||||..||| .|||| ||||||||
BL00353___abn 749 CGGGACCCTATTATGATAAAAGCGGCAAAAATATG-ATGAACGGCGGAGG 797
BSNT_04204 363 CACCATTTTGGATTCGGGCAATGACCAATGGAAAGGACCTGGAGGCCAGG 412
.||.||..||||.||.||||||||||..||||||||.||.|||...||||
BL00353___abn 798 GACGATCCTGGACTCCGGCAATGACCGCTGGAAAGGGCCGGGACATCAGG 847
BSNT_04204 413 ATATTGTGAACGGAAAC---ATTCTTGTTCGCCATGCCTATGATGCAAAT 459
||.||.||||| ||| ||.|||||..|.|||||.||.||.||....
BL00353___abn 848 ATGTTCTGAAC---AACTCGATCCTTGTCAGGCATGCTTACGACGCGCTG 894
BSNT_04204 460 AACAATGGCATTCCGAAGCTTCTCATCAATGATTTGAATTGGAGCTC--- 506
.|||||||..|..|.|||||.|||||||||||.|||.|.|||...||
BL00353___abn 895 GACAATGGTGTATCAAAGCTGCTCATCAATGACTTGTACTGGGATTCCCA 944
BSNT_04204 507 -GGGCTGGCCGTCCTATTGA 525
||| ||||||.|.||||.|
BL00353___abn 945 AGGG-TGGCCGACTTATTAA 963
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