Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04198 and BL00349
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence pep-align/BSNT_04198___araM.1.5803.seq
# -bsequence pep-align/BL00349___araM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04198___araM-BL00349___araM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04198___araM-BL00349___araM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04198___araM
# 2: BL00349___araM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 208/411 (50.6%)
# Similarity: 275/411 (66.9%)
# Gaps: 27/411 ( 6.6%)
# Score: 1023.0
#
#
#=======================================
BSNT_04198___ 1 MNRIAADVQRAFE--HAGEKTLPIKVEEIVLGKQAADSLLD-YVKRKNYK 47
||.:.:.|::... ..|....|:.||:|.:|..|.:..|. :||..:||
BL00349___ara 1 MNDLISYVKKTLGACECGTVHHPLTVEKIAIGDNAVEQELPAFVKSASYK 50
BSNT_04198___ 48 HIVLVCDANTHRIAGIDLENRLNQAGFQAECLIIPENEAGVVTADERSLI 97
...::.|..|.|:||..:.:.|.:.. :...:::..||||.|||||::|:
BL00349___ara 51 KAAVIYDETTGRLAGKRIASLLEETA-ETVPVLLEANEAGDVTADEQTLV 99
BSNT_04198___ 98 HVLIHTKQTTDVMIAVGSGTIHDIVRFAAFQRDLPFISYPTAPSVDGFTS 147
..||......||:||.|:|||||||||.|:||.:||||.|||||||||||
BL00349___ara 100 SALIGVPIDADVLIAAGAGTIHDIVRFCAYQRGIPFISVPTAPSVDGFTS 149
BSNT_04198___ 148 AGAPIILYGTKTTIQTKAPSALFADLDLLKAAPQSMVAAGFGDMLGKITS 197
||||:||.|.|.|:||.||.||||||:||..|||:||||||||||||:||
BL00349___ara 150 AGAPLILKGKKQTVQTTAPIALFADLELLCQAPQNMVAAGFGDMLGKVTS 199
BSNT_04198___ 198 LADWEISRHLAGEPYSPAGAKIVQEALAACIEHTEDIAMKTETGIRVLME 247
||||||||.||||||.||.:::.:|||..|::..:|||.|...||..|||
BL00349___ara 200 LADWEISRLLAGEPYCPAASRLTREALDQCLDRKDDIAAKMRDGIEKLME 249
BSNT_04198___ 248 SLLVSGLVMLALDHSRPASGGEHHISHWIEMELMEKKRPQILHGAKVGCA 297
||::||||||.|||||||||||||:||::||:.:|..:.|:||||||||:
BL00349___ara 250 SLILSGLVMLVLDHSRPASGGEHHLSHYLEMKALENNKRQVLHGAKVGCS 299
BSNT_04198___ 298 AVLLTDTYRKLAQDDGLNEFSPSRRQAIQSAYQTLPEGEVLADWLRSAGG 347
|::|||.||.|. |.:.......|||:|.|:.||:|:.:|:|:|..||
BL00349___ara 300 AIMLTDIYRSLI---GASLGDQHAEQAIRSVYEKLPDGKKMAEWMRRIGG 346
BSNT_04198___ 348 PAYFDEIGVGQDSVKNAFRHAHTLRDRCTGLRIINENKTLINHGLYE--- 394
|..|.|:.|.::.|:.|..:||.||||.|||:|||: :||..
BL00349___ara 347 PVSFKELDVEEELVREALAYAHQLRDRYTGLKIINQ------YGLLPGLL 390
BSNT_04198___ 394 ----------- 394
BL00349___ara 391 GKGPGVKGVKM 401
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