Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04194 and BL00345
See
DNA alignment /
Visit
BSNT_04194 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_04194___abfA.1.5803.seq
# -bsequence pep-align/BL00345___abfA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04194___abfA-BL00345___abfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04194___abfA-BL00345___abfA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04194___abfA
# 2: BL00345___abfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity: 378/503 (75.1%)
# Similarity: 430/503 (85.5%)
# Gaps: 4/503 ( 0.8%)
# Score: 2102.0
#
#
#=======================================
BSNT_04194___ 1 --MKKARMIVDKEYKIGEVDKRIYGSFIEHMGRAVYEGIYEPDHPEADED 48
:.||:|.:|||||:.|:|||||||||||:||||||||||||||||||.
BL00345___abf 1 MTVHKAKMTIDKEYKVAEIDKRIYGSFIEHLGRAVYEGIYEPDHPEADES 50
BSNT_04194___ 49 GFRKDVQSLIKELQVPIIRYPGGNFLSGYNWEDGVGPVENRPRRLDLAWQ 98
||||||..|::||:||.||||||||:|||||||||||||.||.||||||.
BL00345___abf 51 GFRKDVIKLVRELKVPFIRYPGGNFVSGYNWEDGVGPVEQRPTRLDLAWA 100
BSNT_04194___ 99 TTETNEVGTNEFLSWAKKVNTEVNMAVNLGTRGIDAARNLVEYCNHPKGS 148
|||.|.:|||||:.|||.|..||||||||||||||||||||||||||.||
BL00345___abf 101 TTEPNLIGTNEFMDWAKLVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGS 150
BSNT_04194___ 149 YWSDLRRSHGYEQPYGIKTWCLGNEMDGPWQIGHKTADEYGRLAAETAKV 198
|:||||:||||::|:.|||||||||||||||||||||.||||||||.|||
BL00345___abf 151 YYSDLRKSHGYKEPHKIKTWCLGNEMDGPWQIGHKTAAEYGRLAAEAAKV 200
BSNT_04194___ 199 MKWVDPSIELVACGSSNSGMPTFIDWEAKVLEHTYEHVDYISLHTYYGNR 248
|||.||||||||||||.||||||||||..||:||||||:|||||:|||||
BL00345___abf 201 MKWTDPSIELVACGSSGSGMPTFIDWETTVLDHTYEHVEYISLHSYYGNR 250
BSNT_04194___ 249 DNNLPNYLARSMDLDHFIKSVAATCDYVKAKTCSKKTINLSLDEWNVWYH 298
||:||||||||:|:|||||:|.:.|||:|||..|||||:||.||||||||
BL00345___abf 251 DNDLPNYLARSLDMDHFIKTVISVCDYMKAKKKSKKTIHLSYDEWNVWYH 300
BSNT_04194___ 299 SNEADKKVEPWITARPILEDIYNFEDALLVGSLLITMLQHADRVKIACLA 348
|||.||:.|.|..|..:||||||||||||||.:|||||:|||||||||||
BL00345___abf 301 SNEKDKEAERWAKAPHLLEDIYNFEDALLVGCMLITMLKHADRVKIACLA 350
BSNT_04194___ 349 QLVNVIAPIMTEKGGEAWRQPIFYPYMHASVYGRGESLKPLISSPKYDCS 398
|||||||||||:||||||||.||||:|||||||||..|:..:||||||..
BL00345___abf 351 QLVNVIAPIMTDKGGEAWRQTIFYPFMHASVYGRGTVLQTAVSSPKYDAK 400
BSNT_04194___ 399 DFTDVPYVDAAVVYSEEEETLTIFAVNKAEDQ-METEISLRGFESYQIAE 447
|||||||:::..|::||.|.||:||||:|.|. :|.|..:|.||.|.::|
BL00345___abf 401 DFTDVPYLESVSVFNEEAEELTVFAVNRATDAGLEMEADMRSFEGYSVSE 450
BSNT_04194___ 448 HIVLEHQDIKATNQHNRKNVVPHSNGSSSVSENGLTGHFTPLSWNVIRLK 497
||||||:|.||||:.:|.||||||.|.:.|.:..||.|...|||||||:|
BL00345___abf 451 HIVLEHEDHKATNEKDRNNVVPHSGGDAKVCDGRLTAHLPKLSWNVIRMK 500
BSNT_04194___ 498 KQS 500
||
BL00345___abf 501 KQ- 502
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.