Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_04194 and BL00345

See DNA alignment / Visit BSNT_04194 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence pep-align/BSNT_04194___abfA.1.5803.seq
#    -bsequence pep-align/BL00345___abfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04194___abfA-BL00345___abfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04194___abfA-BL00345___abfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04194___abfA
# 2: BL00345___abfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity:     378/503 (75.1%)
# Similarity:   430/503 (85.5%)
# Gaps:           4/503 ( 0.8%)
# Score: 2102.0
# 
#
#=======================================

BSNT_04194___      1 --MKKARMIVDKEYKIGEVDKRIYGSFIEHMGRAVYEGIYEPDHPEADED     48
                       :.||:|.:|||||:.|:|||||||||||:||||||||||||||||||.
BL00345___abf      1 MTVHKAKMTIDKEYKVAEIDKRIYGSFIEHLGRAVYEGIYEPDHPEADES     50

BSNT_04194___     49 GFRKDVQSLIKELQVPIIRYPGGNFLSGYNWEDGVGPVENRPRRLDLAWQ     98
                     ||||||..|::||:||.||||||||:|||||||||||||.||.||||||.
BL00345___abf     51 GFRKDVIKLVRELKVPFIRYPGGNFVSGYNWEDGVGPVEQRPTRLDLAWA    100

BSNT_04194___     99 TTETNEVGTNEFLSWAKKVNTEVNMAVNLGTRGIDAARNLVEYCNHPKGS    148
                     |||.|.:|||||:.|||.|..||||||||||||||||||||||||||.||
BL00345___abf    101 TTEPNLIGTNEFMDWAKLVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGS    150

BSNT_04194___    149 YWSDLRRSHGYEQPYGIKTWCLGNEMDGPWQIGHKTADEYGRLAAETAKV    198
                     |:||||:||||::|:.|||||||||||||||||||||.||||||||.|||
BL00345___abf    151 YYSDLRKSHGYKEPHKIKTWCLGNEMDGPWQIGHKTAAEYGRLAAEAAKV    200

BSNT_04194___    199 MKWVDPSIELVACGSSNSGMPTFIDWEAKVLEHTYEHVDYISLHTYYGNR    248
                     |||.||||||||||||.||||||||||..||:||||||:|||||:|||||
BL00345___abf    201 MKWTDPSIELVACGSSGSGMPTFIDWETTVLDHTYEHVEYISLHSYYGNR    250

BSNT_04194___    249 DNNLPNYLARSMDLDHFIKSVAATCDYVKAKTCSKKTINLSLDEWNVWYH    298
                     ||:||||||||:|:|||||:|.:.|||:|||..|||||:||.||||||||
BL00345___abf    251 DNDLPNYLARSLDMDHFIKTVISVCDYMKAKKKSKKTIHLSYDEWNVWYH    300

BSNT_04194___    299 SNEADKKVEPWITARPILEDIYNFEDALLVGSLLITMLQHADRVKIACLA    348
                     |||.||:.|.|..|..:||||||||||||||.:|||||:|||||||||||
BL00345___abf    301 SNEKDKEAERWAKAPHLLEDIYNFEDALLVGCMLITMLKHADRVKIACLA    350

BSNT_04194___    349 QLVNVIAPIMTEKGGEAWRQPIFYPYMHASVYGRGESLKPLISSPKYDCS    398
                     |||||||||||:||||||||.||||:|||||||||..|:..:||||||..
BL00345___abf    351 QLVNVIAPIMTDKGGEAWRQTIFYPFMHASVYGRGTVLQTAVSSPKYDAK    400

BSNT_04194___    399 DFTDVPYVDAAVVYSEEEETLTIFAVNKAEDQ-METEISLRGFESYQIAE    447
                     |||||||:::..|::||.|.||:||||:|.|. :|.|..:|.||.|.::|
BL00345___abf    401 DFTDVPYLESVSVFNEEAEELTVFAVNRATDAGLEMEADMRSFEGYSVSE    450

BSNT_04194___    448 HIVLEHQDIKATNQHNRKNVVPHSNGSSSVSENGLTGHFTPLSWNVIRLK    497
                     ||||||:|.||||:.:|.||||||.|.:.|.:..||.|...|||||||:|
BL00345___abf    451 HIVLEHEDHKATNEKDRNNVVPHSGGDAKVCDGRLTAHLPKLSWNVIRMK    500

BSNT_04194___    498 KQS    500
                     || 
BL00345___abf    501 KQ-    502


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.