Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04172 and BL00334

See DNA alignment / Visit BSNT_04172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_04172___yshC.1.5803.seq
#    -bsequence pep-align/BL00334___yshC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04172___yshC-BL00334___yshC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04172___yshC-BL00334___yshC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04172___yshC
# 2: BL00334___yshC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity:     460/571 (80.6%)
# Similarity:   506/571 (88.6%)
# Gaps:           1/571 ( 0.2%)
# Score: 2360.0
# 
#
#=======================================

BSNT_04172___      1 MHKKDIIRLLETIAVYMELKGDNPFKVSAFRKAAAALEQDDRSLSEMDDM     50
                     |||||||:||||||:|||||||||||:|||||||||||||||||||:|||
BL00334___ysh      1 MHKKDIIKLLETIAIYMELKGDNPFKISAFRKAAAALEQDDRSLSEIDDM     50

BSNT_04172___     51 MSLSGIGKGTYSVIKEYIDEGKSSTLESLQKEVPEGLVPLLKLPGLGGKK    100
                     .||||||||||:|||||:|.|.|.|||.|::|||||||||||||||||||
BL00334___ysh     51 TSLSGIGKGTYAVIKEYMDTGASGTLERLKEEVPEGLVPLLKLPGLGGKK    100

BSNT_04172___    101 IAKLYKELGVHDAESLKEACEQQKVQGLAGFGKKSEEKILQALGEAGKQP    150
                     |||||:||||.||.||||||||||||||||||||:|||||||||||||:|
BL00334___ysh    101 IAKLYQELGVCDAASLKEACEQQKVQGLAGFGKKTEEKILQALGEAGKRP    150

BSNT_04172___    151 ERFPIGYALRIAREIEEHLSQFTHIIKFSRAGSLRRARETVKDLDYIIAT    200
                     ||:||..||.:|..|||.|.....:||||||||||||:|||||||||:|.
BL00334___ysh    151 ERYPIAVALAVADIIEEQLEGLPGLIKFSRAGSLRRAKETVKDLDYIMAV    200

BSNT_04172___    201 DHPAEVREQLLELPNIKSVIASGDTKVSVILSFEYETSVDFRLVTEEQFP    250
                     ..|..|||.||:|.|||.|||:||||||:..:||||.|.|||||||||||
BL00334___ysh    201 TDPELVREGLLKLSNIKEVIAAGDTKVSLTFAFEYEISADFRLVTEEQFP    250

BSNT_04172___    251 TTLHHFTGSKDHNIKMRQIAKERGERISEYGVETVETGEIKTFPSEREFY    300
                     ||||||||||||||||||:|||:||||||||||||||||||||.||:||:
BL00334___ysh    251 TTLHHFTGSKDHNIKMRQLAKEKGERISEYGVETVETGEIKTFSSEKEFF    300

BSNT_04172___    301 AHFGLPLIPPEIRESGQEVETYSDSIELIEPGQIKGDLHMHSTWSDGAFS    350
                     ||||||.||||:||:|:|||.||..|.|:....|:|||||||.|||||||
BL00334___ysh    301 AHFGLPFIPPELRETGREVEDYSVDIGLVSAEDIQGDLHMHSAWSDGAFS    350

BSNT_04172___    351 IREMAEACIKKGYQYMAITDHSQYLKVANGLTAERLKQQAKEIDALNAEF    400
                     ||||||||:.|||:||||||||||||||.|||.|||:.||||||.||.||
BL00334___ysh    351 IREMAEACMAKGYRYMAITDHSQYLKVAGGLTPERLRMQAKEIDELNKEF    400

BSNT_04172___    401 ENFRILKGVEMDILPDGTLDYDDDMLAEMDIVIASIHSSFNQPEHVIMKR    450
                     .:|.|.|||||||||||||||||::|||||:|||||||||:||:||||||
BL00334___ysh    401 TDFHIFKGVEMDILPDGTLDYDDELLAEMDLVIASIHSSFSQPQHVIMKR    450

BSNT_04172___    451 LETALTNKHVDIIAHPTGRLIGRRAGYEIDIDQLIELARKTNTALELNAN    500
                     |||||.|:||||||||||||||||||||:|||||||||:|||||||||||
BL00334___ysh    451 LETALLNQHVDIIAHPTGRLIGRRAGYEVDIDQLIELAKKTNTALELNAN    500

BSNT_04172___    501 PARLDLRTEHLMKANEQGVTLVINTDAHNIEMLDDMKTGVTAARKGWTET    550
                     |||||||.|||:|||..||||||||||||..|||||||||||||||||..
BL00334___ysh    501 PARLDLRMEHLIKANAAGVTLVINTDAHNTAMLDDMKTGVTAARKGWTPK    550

BSNT_04172___    551 KNVLNARSLKDVEVFLKRND-    570
                     .||||.||.::|:.||.|:. 
BL00334___ysh    551 ANVLNTRSFEEVQAFLSRHRS    571


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