Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04170 and BL00332

See DNA alignment / Visit BSNT_04170 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_04170___yshE.1.5803.seq
#    -bsequence pep-align/BL00332___yshE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04170___yshE-BL00332___yshE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04170___yshE-BL00332___yshE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04170___yshE
# 2: BL00332___yshE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:     116/134 (86.6%)
# Similarity:   128/134 (95.5%)
# Gaps:           0/134 ( 0.0%)
# Score: 612.0
# 
#
#=======================================

BSNT_04170___      1 MSDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVA     50
                     |.:||||.||||||||||:|||||:||:||||||.|||||||||||:|||
BL00332___ysh      1 MKEFWENNLVEIAAYYSVSVLCLVIFLSVFELVTTYKNWEEIQKGNMAVA     50

BSNT_04170___     51 MATGGKILGIANVFQHSISQHNSLLQMIGWGVYGFVMLLISYFIFEFLTP    100
                     |||||||||||||.|.|||||||||||:|||::||::|||.|||||||||
BL00332___ysh     51 MATGGKILGIANVLQKSISQHNSLLQMMGWGLFGFILLLIGYFIFEFLTP    100

BSNT_04170___    101 RFKIDQEIENDNRAVGFISFVISVGLSFVVAAGI    134
                     |||||:|||||||||||||||||||||||||:||
BL00332___ysh    101 RFKIDKEIENDNRAVGFISFVISVGLSFVVASGI    134


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.