Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04166 and BL00329

See DNA alignment / Visit BSNT_04166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_04166___ysiB.1.5803.seq
#    -bsequence pep-align/BL00329___ysiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04166___ysiB-BL00329___ysiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04166___ysiB-BL00329___ysiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04166___ysiB
# 2: BL00329___ysiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     189/258 (73.3%)
# Similarity:   221/258 (85.7%)
# Gaps:           0/258 ( 0.0%)
# Score: 965.0
# 
#
#=======================================

BSNT_04166___      1 MNAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSII     50
                     |.|:|.|||..||.:||.:|||||||:::||:||:|||:......|||::
BL00329___ysi      1 MAALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVV     50

BSNT_04166___     51 IHGEGRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAA    100
                     ||||||||||||||||||||....|.:.||::|||:.|::||||||:|||
BL00329___ysi     51 IHGEGRFFSAGADIKEFTSLMDGSDYANLADKGQQIFEKVESFPKPVIAA    100

BSNT_04166___    101 IHGAALGGGLELAMACHIRIATVDAKLGLPELNLGIIPGFAGTQRLPRYV    150
                     |||||||||||||||||||||...|||||||||||||||||||||||:||
BL00329___ysi    101 IHGAALGGGLELAMACHIRIAEESAKLGLPELNLGIIPGFAGTQRLPKYV    150

BSNT_04166___    151 GTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEK    200
                     |||||||:||:.||||||||.:.|||:|.|.:|.||::|||.||.|||||
BL00329___ysi    151 GTAKALEMIGTSEPISGKEAFEYGLVTILAANEEEVLQKAKELAQKFAEK    200

BSNT_04166___    201 SPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEK    250
                     ||||:|.::|||.|:|||||||.||||.|.|||.|:||||||||||||||
BL00329___ysi    201 SPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDAKEGIQAFLEK    250

BSNT_04166___    251 RKPQFKGE    258
                     |||.|||:
BL00329___ysi    251 RKPHFKGK    258


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.