Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04166 and BL00329
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04166___ysiB.1.5803.seq
# -bsequence dna-align/BL00329___ysiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04166___ysiB-BL00329___ysiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04166___ysiB-BL00329___ysiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04166___ysiB
# 2: BL00329___ysiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity: 565/806 (70.1%)
# Similarity: 565/806 (70.1%)
# Gaps: 58/806 ( 7.2%)
# Score: 1883.5
#
#
#=======================================
BSNT_04166___ 1 ATGAATGCAATATCACTGGCAGTTGA---TCAATTTGTGGCAGTTTTGAC 47
|||...|||.|||||...||.||.|| .||..|||.|.|..|| ||
BL00329___ysi 1 ATGGCAGCATTATCATACGCCGTAGACGGCCATGTTGCGACGATT---AC 47
BSNT_04166___ 48 GATTCACAATCCGCCGGCAAATGCGCTTTCCAGCCGGA--TATTAGAAGA 95
||||||..|.|||||||||||||||||.|| |.||.| |..|.|||||
BL00329___ysi 48 GATTCAGCACCCGCCGGCAAATGCGCTATC--GACGCAAGTGCTTGAAGA 95
BSNT_04166___ 96 GCTGTCTTCCTGTCTTGATCAA-TGTGAGA----CA-GATG-CAGGCGTA 138
.||.||..|.||.||||||.|| |.|.||| || |||| ||
BL00329___ysi 96 TCTTTCGGCATGCCTTGATGAACTTTCAGAACGTCAGGATGTCA------ 139
BSNT_04166___ 139 CGAAGCATTATCATTCACGGCGAGGGAAGATTTTTCTCAGCCGGCGCTGA 188
|||||.|..|.||||||||.||.||||||||||||||.||.||||||||
BL00329___ysi 140 -GAAGCGTCGTTATTCACGGGGAAGGAAGATTTTTCTCGGCAGGCGCTGA 188
BSNT_04166___ 189 TATTAAAGAATTTACATCGCTTAAAGGCAATGA-----GGATTCCTCAT- 232
|||||||||.||||||| ||.||| ||.| ||.||
BL00329___ysi 189 TATTAAAGAGTTTACAT----------CATTGATGGACGGGT--CTGATT 226
BSNT_04166___ 233 -TGC-----TCGCTGAGCGCGGCCAGCAGTTAATGGAGAGAATCGAAAGC 276
||| |.|||||....|||||||||.|..|.||.|.|.|.|||...
BL00329___ysi 227 ATGCAAATTTGGCTGATAAGGGCCAGCAGATTTTCGAAAAAGTAGAATCT 276
BSNT_04166___ 277 TTTCCAAAACCGATTATCGCAGCGATTCACGGCGCTGCTCTCGGAGGCGG 326
||||||||||||.|.|||||.|||||||||||.||.|||||.||||||||
BL00329___ysi 277 TTTCCAAAACCGGTGATCGCCGCGATTCACGGGGCCGCTCTTGGAGGCGG 326
BSNT_04166___ 327 GCTGGAGCTTGCGATGGCCTGTCATATCAGAATTGCAAC-AGTAGA-TGC 374
.||.|||||.||||||||.||.||.|||.|.||||| | ||.|.| .||
BL00329___ysi 327 TCTTGAGCTAGCGATGGCATGCCACATCCGGATTGC--CGAGGAAAGCGC 374
BSNT_04166___ 375 TAAGCTGGGGCTCCCGGAGCTTAATCTCGGTATCATTCCGGGTTTTGCGG 424
.|||||.||.||.||.||.||.||||||||.||||||||.||.|||||||
BL00329___ysi 375 AAAGCTCGGCCTTCCCGAACTGAATCTCGGAATCATTCCCGGCTTTGCGG 424
BSNT_04166___ 425 GGACACAGCGCCTTCCGAGATATGTCGGCACAGCCAAAGCATTAGAGCTC 474
|.||.|||||||||||.|..|||||.|||||.||||||||..|.||..|.
BL00329___ysi 425 GAACGCAGCGCCTTCCCAAGTATGTGGGCACCGCCAAAGCGCTTGAAATG 474
BSNT_04166___ 475 ATCGGATCAGGAGAACCGATATCCGGAAAAGAAGCGCTTGATCTCGGACT 524
|||||..||..|||.|||||||||||.||.|||||..||||...|||.||
BL00329___ysi 475 ATCGGGACATCAGAGCCGATATCCGGCAAGGAAGCTTTTGAATACGGTCT 524
BSNT_04166___ 525 TGTCTCAATT---GGAGCGAAAGATGAGGCAGAAGTGATTGAAAAAGCAA 571
||||.|.||| |..|||| ||||.|.|||||||.|..||||.||||
BL00329___ysi 525 TGTCACGATTTTGGCGGCGA---ATGAAGAAGAAGTGCTGCAAAAGGCAA 571
BSNT_04166___ 572 AAGCACTTGCCGCTAAGTTTGCAGAGAAAAGCCCGCAAACGCTGGCATCT 621
|||..||.||....||.||.||.||.|||||.|||||.|||.||||.|.|
BL00329___ysi 572 AAGAGCTCGCACAAAAATTCGCTGAAAAAAGTCCGCAGACGATGGCTTAT 621
BSNT_04166___ 622 TTGCTTGAACTTCTCTATTCCAACAAGGTGTATTCCTATGAAGGCAGCTT 671
.|..|||||||.||..||||.|.|||.||||||||.||||||||..||.|
BL00329___ysi 622 GTCATTGAACTCCTGAATTCGAGCAAAGTGTATTCGTATGAAGGAGGCCT 671
BSNT_04166___ 672 AAAGCTTGAAGCAAAGCGATTTGGGGAAGCATTTGAGTCAGAGGACGCCA 721
.|||||.||||..||....||.||.||||..||..|.||.|||||.||.|
BL00329___ysi 672 CAAGCTAGAAGGGAAATACTTCGGCGAAGTGTTCCAATCCGAGGATGCGA 721
BSNT_04166___ 722 AGGAAGGCATCCAGGCATTTCTCGAAAAAAGAAAGCCTCAGTTCAAAGGC 771
|||||||.||.|||||||||||.|||||..|.|||||.||.||.|||||.
BL00329___ysi 722 AGGAAGGGATTCAGGCATTTCTTGAAAAGCGGAAGCCGCATTTTAAAGGG 771
BSNT_04166___ 772 GAATAA 777
.|||||
BL00329___ysi 772 AAATAA 777
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