Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04148 and BL00320

See DNA alignment / Visit BSNT_04148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_04148___sdhB.1.5803.seq
#    -bsequence pep-align/BL00320___sdhB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04148___sdhB-BL00320___sdhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04148___sdhB-BL00320___sdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04148___sdhB
# 2: BL00320___sdhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     226/254 (89.0%)
# Similarity:   241/254 (94.9%)
# Gaps:           1/254 ( 0.4%)
# Score: 1249.0
# 
#
#=======================================

BSNT_04148___      1 MSEQKTIRFIITRQDTADSTPYDEEFEIPYRPNLNVISALMEIRRNPVNV     50
                     |||.|||:||||||||:||.||.||||||||||:|||||||||||||||.
BL00320___sdh      1 MSENKTIKFIITRQDTSDSNPYQEEFEIPYRPNMNVISALMEIRRNPVNA     50

BSNT_04148___     51 KGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPM    100
                     |||||:|:.||||||||||||||||||||||||||||||||||||||:||
BL00320___sdh     51 KGEKTSPIAWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLEPM    100

BSNT_04148___    101 KTFPVVRDLQVDRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY    150
                     ||||||||||||||||||||||||||:||||||||||||||||:||||||
BL00320___sdh    101 KTFPVVRDLQVDRSRMFDSLKKVKAWVPIDGTYDLGPGPRMPERRRQWAY    150

BSNT_04148___    151 ELSKCMTCGVCLEACPNVNSKSKFMGPAPMSQVRLFNAHPTGAMNKSERL    200
                     |||||||||||||||||||.|:.||||||:|||||||.||||||||||||
BL00320___sdh    151 ELSKCMTCGVCLEACPNVNDKTNFMGPAPLSQVRLFNTHPTGAMNKSERL    200

BSNT_04148___    201 EALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRDTNLQAFRNFFGS    250
                     ||:|.:||||:||||||||||||||||||||||||||||.:|||:|||||
BL00320___sdh    201 EAIMGDGGLAECGNSQNCVQSCPKGIPLTTSIAALNRDTTVQAFKNFFGS    250

BSNT_04148___    251 DRV-    253
                     |.. 
BL00320___sdh    251 DNTE    254


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