Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04146 and BL00319

See DNA alignment / Visit BSNT_04146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_04146___ysmA.1.5803.seq
#    -bsequence pep-align/BL00319___ysmA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04146___ysmA-BL00319___ysmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04146___ysmA-BL00319___ysmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04146___ysmA
# 2: BL00319___ysmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:      98/156 (62.8%)
# Similarity:   117/156 (75.0%)
# Gaps:           9/156 ( 5.8%)
# Score: 501.0
# 
#
#=======================================

BSNT_04146___      1 MKLPAYIDMPFQEWKTSFSFFNEVSVRFSETDMFGHMNNVTPFIYFEEAR     50
                     ||||.||:.||..|..|||||:|||||||||||||||||||||:||||||
BL00319___ysm      1 MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEAR     50

BSNT_04146___     51 ISYFKKLNMM---SENKQ-TMTVVASQQCDYLRQVMPYEELRIYVKTSTV     96
                     |||||.|.:|   |:.|. .:.|||||||||.:|||.:|.|:|.|||::|
BL00319___ysm     51 ISYFKHLGVMDRLSDGKSAAIPVVASQQCDYFQQVMLHERLKIGVKTASV    100

BSNT_04146___     97 GSSSLTLHYLGENREGEPCFTGAVVMVQVSKESGKAVSWTDEEKETLLHT    146
                     |::||||||..:|.||..||||..||||::|::||.|.||||:|..||..
BL00319___ysm    101 GNASLTLHYAAKNGEGGLCFTGLAVMVQIAKDTGKPVKWTDEQKAKLLGN    150

BSNT_04146___    147 R-----    147
                     .     
BL00319___ysm    151 NSFPEK    156


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