Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04142 and BL00315

See DNA alignment / Visit BSNT_04142 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_04142___racE.1.5803.seq
#    -bsequence pep-align/BL00315___racE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04142___racE-BL00315___racE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04142___racE-BL00315___racE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04142___racE
# 2: BL00315___racE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     215/271 (79.3%)
# Similarity:   241/271 (88.9%)
# Gaps:           0/271 ( 0.0%)
# Score: 1123.0
# 
#
#=======================================

BSNT_04142___      1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVL     50
                     |:||||||||||||||||||||||||||.|||:|||||||||||..:|||
BL00315___rac      1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVL     50

BSNT_04142___     51 QYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGA    100
                     .||||:|||||..||||||||||||||||||::|.|.|.|||:||:||||
BL00315___rac     51 SYTWEMTNYLLSRHHIKMLVIACNTATAIALEEISREVAIPVIGVVQPGA    100

BSNT_04142___    101 RAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPF    150
                     |.|||||:||.||||||||||||.|||||||:||.||.|||||||:.|||
BL00315___rac    101 RTAIKVTENQRIGVIGTENTIKSGAYEEALLSLNGDLTVENLACPMFVPF    150

BSNT_04142___    151 VESGKFLDKTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGE    200
                     ||||||||:||||||:|||:||:|:|||:|||||||||||||.|||||||
BL00315___rac    151 VESGKFLDETADEIVRTSLHPLRDSSIDTLILGCTHYPILKEPIQRYMGE    200

BSNT_04142___    201 HVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIAD    250
                     .||||||||||||||||||||.|||:::...|:|.|||||.|.:|.|||:
BL00315___rac    201 RVNIISSGDETAREVSTILSYNGLLSKTAEPPEHLFLTTGERARFTKIAN    250

BSNT_04142___    251 DWFGHEVGHVECISLQEPIKR    271
                     ||||:||.:||.|||||...:
BL00315___rac    251 DWFGYEVKNVESISLQETAVK    271


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