Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04141 and BL00314
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_04141___gerM.1.5803.seq
# -bsequence pep-align/BL00314___gerM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04141___gerM-BL00314___gerM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04141___gerM-BL00314___gerM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04141___gerM
# 2: BL00314___gerM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 273/369 (74.0%)
# Similarity: 309/369 (83.7%)
# Gaps: 3/369 ( 0.8%)
# Score: 1386.0
#
#
#=======================================
BSNT_04141___ 1 MLKKGPAVIGATCLTSALLLSGCGLFQSDKAAEEIDPPQDVTFVNDEAGA 50
|||||...|..|...|||||||||:||||:|:||||||||:|:|.:|...
BL00314___ger 1 MLKKGMKGIAVTVTASALLLSGCGIFQSDQASEEIDPPQDITYVKEEKEQ 50
BSNT_04141___ 51 NSNTTAAKKTESEKSDTA---KADQASSTVMRELYLIDKNGYVVAQTLPL 97
:.......|||.:.|.|. ||.|...|||||||||||||||.||||||
BL00314___ger 51 DKTDKTKDKTEDKGSKTTSDDKAAQTGDTVMRELYLIDKNGYVTAQTLPL 100
BSNT_04141___ 98 PKSESTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAIA 147
||.|.||||||||||:|||||.|||||||||||||||||||||:||||||
BL00314___ger 101 PKQEGTAKQALEYLVEGGPVSNILPNGFRAVLPADTTVNVDIKEDGTAIA 150
BSNT_04141___ 148 DFSNEFKNYKKEDEQKIVQSVTWTLTQFSSIDKVKLRINGHELKEMPVGG 197
||||||||||.||||||||::|||||||:||||||||:|||:||||||.|
BL00314___ger 151 DFSNEFKNYKAEDEQKIVQAITWTLTQFNSIDKVKLRMNGHDLKEMPVNG 200
BSNT_04141___ 198 TPISDDLSRKDGINLETAGVNDLTATHPLTVYYLAENEDSEYYVPVTKRI 247
||||::|||:|||||:||||.|:|||.|:|||||||::...||||||||.
BL00314___ger 201 TPISEELSREDGINLDTAGVTDITATQPVTVYYLAESDKGTYYVPVTKRT 250
BSNT_04141___ 248 DNSEKDDITAAINELAKGPSKVSGLLTDFSEDVKLVSKPKIKDGRVTLDF 297
...|||.:||||.||.:||...||||:||..||||.:||||:||.|||||
BL00314___ger 251 SAKEKDQVTAAIKELTEGPDNKSGLLSDFQGDVKLENKPKIEDGHVTLDF 300
BSNT_04141___ 298 NQSIFGSADEKTKMISSEVLNSIVLTLTEQPDVKSVSVKVNGKSELVNEK 347
|::|:||||.:.|:||.||||||||||||.||||||||.|||||||||||
BL00314___ger 301 NEAIYGSADGQKKVISDEVLNSIVLTLTELPDVKSVSVTVNGKSELVNEK 350
BSNT_04141___ 348 GEKLTEPVSRPSQVNTGSF 366
||||::||||||:||||||
BL00314___ger 351 GEKLSKPVSRPSKVNTGSF 369
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