Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04140 and BL00312

See DNA alignment / Visit BSNT_04140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_04140___rph.1.5803.seq
#    -bsequence pep-align/BL00312___rph.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04140___rph-BL00312___rph.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04140___rph-BL00312___rph.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04140___rph
# 2: BL00312___rph
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     203/246 (82.5%)
# Similarity:   227/246 (92.3%)
# Gaps:           1/246 ( 0.4%)
# Score: 1056.0
# 
#
#=======================================

BSNT_04140___      1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPF     50
                     ||:|||:::||||:|.|||||:|||||||||.|.||||||||||||||||
BL00312___rph      1 MRYDGRKNNELRPVTMDLDFITHPEGSVLITVGGTKVICNASVEDRVPPF     50

BSNT_04140___     51 LRGGGKGWITAEYSMLPRATNQRTIRESSKGKISGRTMEIQRLIGRALRA    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BL00312___rph     51 LRGEGKGWITAEYSMLPRATNQRTIRESSKGKISGRTMEIQRLIGRALRA    100

BSNT_04140___    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTI    150
                     ||||||||||||||||||||||||||||||||||.|||:|:|:|::.|.:
BL00312___rph    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFTAMALAVGRLVEKGAL    150

BSNT_04140___    151 KTSPITDFLAAISVGIDKEQGILLDLNYEEDSSAEVDMNVIMTGSGRFVE    200
                     |..||||||||.|||||||:|::|||||:|||:|||||||:|||.|||||
BL00312___rph    151 KEMPITDFLAATSVGIDKEKGLILDLNYQEDSAAEVDMNVVMTGEGRFVE    200

BSNT_04140___    201 LQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEVLGDSLPELK-    245
                     ||||||||||||.:|:|||.||||||.||::||||||||....:: 
BL00312___rph    201 LQGTGEEATFSRSELDGLLELAEKGIAELLEKQKEVLGDVALSIQQ    246


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