Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04138 and BL00311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_04138___ysnA.1.5803.seq
# -bsequence pep-align/BL00311___ysnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04138___ysnA-BL00311___ysnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04138___ysnA-BL00311___ysnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04138___ysnA
# 2: BL00311___ysnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 145/196 (74.0%)
# Similarity: 171/196 (87.2%)
# Gaps: 1/196 ( 0.5%)
# Score: 768.0
#
#
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BSNT_04138___ 1 MKEAIIATHNPGKVKEFKEILEPRGYDVKSLAEIGFTEEIEETGHTFEEN 50
|||.||||.|.|||:|||.:|||||||||||.:||:|.||||||.|||||
BL00311___ysn 1 MKEVIIATKNEGKVREFKAMLEPRGYDVKSLLDIGYTPEIEETGQTFEEN 50
BSNT_04138___ 51 AILKAEAVAKAVNKMVIADDSGLSIDNLGGRPGVYSARYAGEQKDDQANI 100
|::|||.::|...|:|||||||||:|.|||.|||||||||||:|:|.||:
BL00311___ysn 51 AVIKAETISKETGKIVIADDSGLSVDYLGGSPGVYSARYAGEEKNDLANL 100
BSNT_04138___ 101 EKVLSELKGIEKEQRTARFRCALAVSIPGEETKTVEGHVEGYIAEEPRGE 150
:|:|.||:|:|||.|:||||||||:.|||:|||||||.|||||.|||||.
BL00311___ysn 101 KKLLKELEGVEKEDRSARFRCALAICIPGQETKTVEGSVEGYITEEPRGT 150
BSNT_04138___ 151 YGFGYDPIFIVKDKDKTMAELTSDEKNKISHRADALKKLSKLLEA- 195
.||||||:|:|||||:|||||:|.|||||||||:||||||.||:.
BL00311___ysn 151 NGFGYDPVFLVKDKDQTMAELSSGEKNKISHRAEALKKLSALLDQA 196
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