Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04138 and BL00311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_04138___ysnA.1.5803.seq
# -bsequence dna-align/BL00311___ysnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04138___ysnA-BL00311___ysnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04138___ysnA-BL00311___ysnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04138___ysnA
# 2: BL00311___ysnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 602
# Identity: 445/602 (73.9%)
# Similarity: 445/602 (73.9%)
# Gaps: 25/602 ( 4.2%)
# Score: 1561.0
#
#
#=======================================
BSNT_04138___ 1 ATGAAAGAAGCAATTATTGCGACACATAATCCG--GGAAAAGTGAAGGAA 48
|||||.||||..||.||||| |||..||..|| ||.|||||.|.||||
BL00311___ysn 1 ATGAAGGAAGTCATCATTGC--CACGAAAAACGAAGGGAAAGTCAGGGAA 48
BSNT_04138___ 49 TTCAAAGAAATTCTTGAGCCAAGAGGCTATGATGTCAAATCTTTAGCT-G 97
|||||||..||.|||||.||.||.|||||.||||||||||||||| || |
BL00311___ysn 49 TTCAAAGCGATGCTTGAACCGAGGGGCTACGATGTCAAATCTTTA-CTGG 97
BSNT_04138___ 98 AAATTGGATTTACAGAAGAAATTGAAGAAACAGGCCATACATTTGAAGAA 147
|.||.||.|.||||...|||||.||||||||.||.||.||.|||||||||
BL00311___ysn 98 ACATCGGCTATACACCCGAAATCGAAGAAACCGGGCAGACTTTTGAAGAA 147
BSNT_04138___ 148 AATGCCATTCTGAAAGCGGAAGCTGTTGCCAAAGCAGTAAAC----AAAA 193
||.||..|..|.|||||||||.|..||.|.|||| |||| ||||
BL00311___ysn 148 AACGCTGTGATTAAAGCGGAAACAATTTCGAAAG----AAACCGGAAAAA 193
BSNT_04138___ 194 TGGTGATTGCGGACGACTCCGGTCTATCCATCGATAATCTTGGCGGCAGA 243
|.||||||||.|||||||||||.||.||..||||..||||.||||||||.
BL00311___ysn 194 TCGTGATTGCCGACGACTCCGGCCTGTCTGTCGACTATCTCGGCGGCAGC 243
BSNT_04138___ 244 CCCGGGGTTTATTCAGCCCGCTATGCAGGGGAACAGAAAGACGACCAGGC 293
|||||.||.||.||.||||||||||||||.|||.|||||.||||.|..||
BL00311___ysn 244 CCCGGCGTATACTCGGCCCGCTATGCAGGAGAAGAGAAAAACGATCTCGC 293
BSNT_04138___ 294 AAATATCGAAAAAG-TGCTCAGCGAGCTGAAAGGTATCGAAAAAGAACAG 342
.|||.| ||||||| |..|.|..|||||..||||..|.|||||||||.|.
BL00311___ysn 294 CAATCT-GAAAAAGCTATTGAAAGAGCTCGAAGGGGTGGAAAAAGAAGAC 342
BSNT_04138___ 343 CGCACCGCCCGTTTCCGCTGCGCACTGGCCGTGAGTATTCCCGGTGAGGA 392
||..||||..|.|||.|.|||||.||.||..|..|.||||||||..||||
BL00311___ysn 343 CGTTCCGCGAGGTTCAGATGCGCGCTCGCAATATGCATTCCCGGACAGGA 392
BSNT_04138___ 393 AACAAAAACAGTCGAAGGCCATGTTGAAGGGTATATTGCCGAAGAACCGA 442
|||.|||||.||||||||...|||.||||||||.|||.|||||||.|||.
BL00311___ysn 393 AACGAAAACGGTCGAAGGTTCTGTGGAAGGGTACATTACCGAAGAGCCGC 442
BSNT_04138___ 443 GAGG-AGAATATGGCTTTGGCTATGACCCAATCTTTATCGTGAAAGATAA 491
|.|| |.|| |.|||||.|||||.|||||..|.|||.||||.|||||.||
BL00311___ysn 443 GCGGCACAA-ACGGCTTCGGCTACGACCCGGTTTTTCTCGTCAAAGACAA 491
BSNT_04138___ 492 AGATAAGACAATGGCTGAACTGACAAGTGATGAAAAAAATAAAATCAGCC 541
||||.|.||.|||||.||.||..||||.|..|||||.||.||||||||||
BL00311___ysn 492 AGATCAAACGATGGCCGAGCTCTCAAGCGGCGAAAAGAACAAAATCAGCC 541
BSNT_04138___ 542 ATAGGGCTGACGCGCTTAAAAAGCTGTCTAAGCTT--TTGG---AGGCAT 586
|.||.||.||.|||||.||||||||||| .|||| |||| |.||.|
BL00311___ysn 542 ACAGAGCGGAAGCGCTGAAAAAGCTGTC--CGCTTTATTGGATCAAGCGT 589
BSNT_04138___ 587 AA 588
||
BL00311___ysn 590 AA 591
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