Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04208 and BL00310

See DNA alignment / Visit BSNT_04208 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_04208___ysdB.1.5803.seq
#    -bsequence pep-align/BL00310___ysdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04208___ysdB-BL00310___ysdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04208___ysdB-BL00310___ysdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04208___ysdB
# 2: BL00310___ysdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:      84/133 (63.2%)
# Similarity:   106/133 (79.7%)
# Gaps:           3/133 ( 2.3%)
# Score: 458.5
# 
#
#=======================================

BSNT_04208___      1 MFVMVLRIILLALFAYCIYAVVKYVANPKRRLKLAQSKEHFYIIDEQNNT     50
                     |.|::||:.||||..|.:|..|:::.:|.||||.||:|:|||::|||.||
BL00310___ysd      1 MIVIILRLALLALLVYVVYRAVQFLGSPDRRLKSAQAKKHFYVLDEQKNT     50

BSNT_04208___     51 RKNFQLTYKGVLFEGEKHIPSKDHPLFIHTIFVWTESP-EKLKHFSAKDF     99
                     |||.:||:||||||||||||||||||||||||||||:| |||..|:.:||
BL00310___ysd     51 RKNLKLTFKGVLFEGEKHIPSKDHPLFIHTIFVWTEAPEEKLSSFTEEDF    100

BSNT_04208___    100 ENIEEKVLERYPNCKIDWDQPIK--LAKKAEER    130
                     ..:||.:.|.||:||||||..|:  ..|||||:
BL00310___ysd    101 AELEENIKEHYPDCKIDWDSNIQKWKNKKAEEQ    133


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