Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05283 and BL00256
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_05283___yvcS.1.5803.seq
# -bsequence pep-align/BL00256.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05283___yvcS-BL00256.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05283___yvcS-BL00256.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05283___yvcS
# 2: BL00256
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 198/678 (29.2%)
# Similarity: 336/678 (49.6%)
# Gaps: 82/678 (12.1%)
# Score: 803.5
#
#
#=======================================
BSNT_05283___ 1 MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIY 50
|..|..|..|::.|.:.|.|||||.:|.|.|||.|..|.|||.:..|::.
BL00256 1 MTFRQFAFNNVIRNKRLYAAYFLSSMFTVMVFFAFAIFAFHPVMTSDSLT 50
BSNT_05283___ 51 GGSLVKTCLSAALVV----IIVFCIFFITYSNSAFLQARKKEFGLLTLFG 96
.| :....|..|:| |.||..||:.||.|:|||:||||||:|.:.|
BL00256 51 SG--IGQHASFGLLVAGGIIFVFSFFFVLYSMSSFLQSRKKEFGVLMIQG 98
BSNT_05283___ 97 TSKQQLRKMIYYEQSLISLAAIAAGIGAGLLFSKLFFMIMTWMLSVKVPI 146
.|.:|:|.|::.|..||...|...||..||:|:||..:....:|.:...:
BL00256 99 MSMRQIRMMVFLENMLIGFFATIGGIVLGLVFAKLILLTAENVLIIDNKL 148
BSNT_05283___ 147 SFAIVPKAFVMTIAGF--LILFQTLLILSLGRIRKLEIIELIKSAKKPKS 194
.|.....|.::|...| |.||.:.|:..:.|..|| |.|:|..|..|.
BL00256 149 DFYFPLMAMIVTFISFNGLFLFISFLVSFVLRSEKL--IVLLKGNKISKG 196
BSNT_05283___ 195 LPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLVGTYFFF 244
.|..|..||:::.:.|..|||.:.......::..:.|:.|:|::|||..|
BL00256 197 EPKASALLTLVAAVLLAGGYYTALIVKEGGVLVAMVPVTIVVIIGTYLLF 246
BSNT_05283___ 245 TQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAV 294
||.||...|.|.:::..|::.||:|:.|::.:|:||::|..|:.::|:.|
BL00256 247 TQLSVYVIRRLKKRETLFWRKTNMILFSDLSYRMKDNSRTFFMVAIISTV 296
BSNT_05283___ 295 ILTATGVIYMFYSDLQRQEEQSIPQSVSW--------VEKDASRFQVMKP 336
..:|.|.:|.|.:.:....::..|.:.|: :|||.: .:..
BL00256 297 AFSAIGTLYGFQTLVTNGIKEMNPHTFSYKPPETNKHIEKDVA---FIND 343
BSNT_05283___ 337 ETAENTLK--KAHAVIKYKVDATGIPVTFQSDLPYGNKKMEAEALLISEK 384
...|..:| ||.||::| .|..| :|: |::.|.
BL00256 344 TLDERNIKTDKASAVLQY-FDVGG------NDM-----------LIVKES 375
BSNT_05283___ 385 VYNQVAKEKGFPVIHLQENEAFINVSFQMMVKDTFGEGETAAFHMKSG-- 432
.||:.|...|...:.|:: |:...|.:.:|.|
BL00256 376 DYNKFADLVGADHVKLED-----------------GKAAAAEYEVKIGLE 408
BSNT_05283___ 433 --------KTLSYVMKKQQNKGILMSVDGVSR--LLVVSEKSFGSLSQDV 472
.::.:...||......:....:|. ..:|::|.|..|.:.
BL00256 409 GDDDQQLPSSIPFANGKQLKADQTIRSKALSEPSYYIVTDKDFAQLKKP- 457
BSNT_05283___ 473 PLKEQMRMVGYELEH--WQETVDVSEKLENMVPKEHTSDFQTRAPSYQI- 519
|.:.|...::.:. ....|...|.|:..:...:.. |..|::
BL00256 458 --KSENRFYAWQAKEADGMALVKAGEALQKKLDYMYFG-----AVDYEVY 500
BSNT_05283___ 520 -VKQGVALMLFIGLFVSVLFFIVQGSMLYLRMFTEIEDTRVQVLALKRIG 568
:.:|...:||:|||:.::||:..||.||.|::|:::|.:.:..::.::|
BL00256 501 NISKGYGPILFVGLFIGIVFFVSAGSFLYFRLYTDLDDDKQKFKSIAKMG 550
BSNT_05283___ 569 VTDKEIHSILGKQIGFLFFIPFIAGTIHAGFAYAALSNMLNSNLFLEAVI 618
:||:|:|.:|.:|||.|||.|.....:|...|..|||:....|||.|:.:
BL00256 551 LTDRELHKVLNRQIGILFFAPIAVALVHGAVALTALSHAFQYNLFKESAM 600
BSNT_05283___ 619 VIFIYFVFQAVYYIVTRHIYKRAVLQRM 646
|:.::|..|.:||.:.|..|.:.:...:
BL00256 601 VLGVFFAIQVIYYFIVRFYYTKQIKAAI 628
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