Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06090 and BL00239

See DNA alignment / Visit BSNT_06090 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence pep-align/BSNT_06090___iolH.1.5803.seq
#    -bsequence pep-align/BL00239___iolH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06090___iolH-BL00239___iolH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06090___iolH-BL00239___iolH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06090___iolH
# 2: BL00239___iolH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     280/290 (96.6%)
# Similarity:   286/290 (98.6%)
# Gaps:           3/290 ( 1.0%)
# Score: 1476.0
# 
#
#=======================================

BSNT_06090___      1 MKLALDPSMYRDDLTLEETVYKTAELGYEYIELSPREDFCPFYKYPKVDS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00239___iol      1 MKLALDPSMYRDDLTLEETVYKTAELGYEYIELSPREDFCPFYKYPKVDS     50

BSNT_06090___     51 AKIKQLKRLLRDTGVKLSSLLPLYHWAGPDEDRRQAAVRNWKRAIEIAVE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00239___iol     51 AKIKQLKRLLRDTGVKLSSLLPLYHWAGPDEDRRQAAVRNWKRAIEIAVE    100

BSNT_06090___    101 LEVDLMNSEFSGSKYDPLTSEEKFIKSMDELLPVFEKEGIKLNLQAHPYD    150
                     |||||||||||||||||||||||||||||||||:||||||||||||||||
BL00239___iol    101 LEVDLMNSEFSGSKYDPLTSEEKFIKSMDELLPIFEKEGIKLNLQAHPYD    150

BSNT_06090___    151 FIETHKGAMDMIRALDKDWINLVYSTAHTFFYDDGKGDIETMFDEAGDRL    200
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
BL00239___iol    151 FIETHKGALDMIRALDKDWINLVYSTAHTFFYDDGKGDIETMFDEAGDRL    200

BSNT_06090___    201 THVLFADTYNHKAAHGLRYIVNPPDAQVTVHQHLDIGQGEVDFDTIFRKL    250
                     ||||||||||||||||||||||||||:|||||||||||||||||.|||||
BL00239___iol    201 THVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGEVDFDMIFRKL    250

BSNT_06090___    251 REMKFDGIATNAVFAWVDERADESSRFMLKKMKEE-LGLA    289
                     |||||||||||||||||||||||||||||:|:|:| ||  
BL00239___iol    251 REMKFDGIATNAVFAWVDERADESSRFMLEKLKQELLG--    288


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