Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06090 and BL00239

See Amino acid alignment / Visit BSNT_06090 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_06090___iolH.1.5803.seq
#    -bsequence dna-align/BL00239___iolH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06090___iolH-BL00239___iolH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06090___iolH-BL00239___iolH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06090___iolH
# 2: BL00239___iolH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 870
# Identity:     805/870 (92.5%)
# Similarity:   805/870 (92.5%)
# Gaps:           3/870 ( 0.3%)
# Score: 3756.5
# 
#
#=======================================

BSNT_06090___      1 ATGAAGTTAGCATTGGATCCATCCATGTATCGTGATGATTTAACTTTAGA     50
                     |||||.|||||||||||||||||.|||||||||||||||||.|||||.||
BL00239___iol      1 ATGAAATTAGCATTGGATCCATCGATGTATCGTGATGATTTGACTTTGGA     50

BSNT_06090___     51 GGAAACGGTCTATAAAACGGCGGAGCTTGGCTATGAATATATCGAATTGT    100
                     .||||||||||||||||||||||||||||||||.||||||||||||.|.|
BL00239___iol     51 AGAAACGGTCTATAAAACGGCGGAGCTTGGCTACGAATATATCGAACTAT    100

BSNT_06090___    101 CTCCGCGTGAGGATTTTTGCCCGTTTTATAAATATCCGAAAGTCGATTCA    150
                     |.|||||.||.||||||||.||.||.||||||||||||||||||||||||
BL00239___iol    101 CGCCGCGCGAAGATTTTTGTCCATTCTATAAATATCCGAAAGTCGATTCA    150

BSNT_06090___    151 GCAAAGATCAAACAATTAAAGCGCCTTTTAAGAGATACAGGTGTTAAGCT    200
                     ||.||.|||||||||||||||||.||||||||||||||.|||||||||||
BL00239___iol    151 GCTAAAATCAAACAATTAAAGCGGCTTTTAAGAGATACCGGTGTTAAGCT    200

BSNT_06090___    201 TTCATCGCTTCTTCCTCTTTACCACTGGGCGGGACCCGATGAAGACCGCC    250
                     |||||||||.|||||.||||||||||||||.||.||.||||||||.||||
BL00239___iol    201 TTCATCGCTCCTTCCGCTTTACCACTGGGCAGGTCCTGATGAAGATCGCC    250

BSNT_06090___    251 GCCAGGCAGCAGTGCGCAATTGGAAACGGGCAATCGAAATTGCCGTTGAA    300
                     |.|||||.||.|||||||||||||||.||||||||||||||||.||.||.
BL00239___iol    251 GTCAGGCCGCCGTGCGCAATTGGAAAAGGGCAATCGAAATTGCGGTCGAG    300

BSNT_06090___    301 CTTGAAGTGGATTTGATGAACAGCGAATTCAGCGGTTCAAAATATGATCC    350
                     ||||||||.||||||||||||||.||||||||||||||||||||.|||||
BL00239___iol    301 CTTGAAGTCGATTTGATGAACAGTGAATTCAGCGGTTCAAAATACGATCC    350

BSNT_06090___    351 TTTAACAAGTGAAGAAAAATTTATCAAATCCATGGATGAGCTTCTGCCAG    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BL00239___iol    351 TTTAACAAGTGAAGAAAAATTTATCAAATCCATGGATGAGCTTCTGCCAA    400

BSNT_06090___    401 TCTTTGAAAAAGAAGGTATTAAACTCAATCTTCAAGCCCACCCATACGAT    450
                     ||||||||||||||||.|||||||||||||||||||||||.|||||||||
BL00239___iol    401 TCTTTGAAAAAGAAGGCATTAAACTCAATCTTCAAGCCCATCCATACGAT    450

BSNT_06090___    451 TTTATCGAAACGCACAAAGGTGCGATGGATATGATCCGCGCGCTTGACAA    500
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BL00239___iol    451 TTTATCGAAACGCACAAAGGTGCGTTGGATATGATCCGCGCGCTTGACAA    500

BSNT_06090___    501 GGATTGGATCAATCTTGTCTACTCGACTGCGCATACGTTCTTCTATGATG    550
                     |||||||||.||||||||||||||||||||||||||.|||||.|||||||
BL00239___iol    501 GGATTGGATTAATCTTGTCTACTCGACTGCGCATACATTCTTTTATGATG    550

BSNT_06090___    551 ACGGCAAAGGCGACATCGAGACCATGTTTGACGAAGCCGGCGACCGCCTC    600
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BL00239___iol    551 ACGGCAAAGGCGACATCGAGACAATGTTTGACGAAGCCGGCGACCGCCTC    600

BSNT_06090___    601 ACACATGTTTTATTTGCAGATACCTATAATCATAAAGCGGCTCATGGTCT    650
                     ||||||||||||||.||||||||.|||||||||||||||||||||||.||
BL00239___iol    601 ACACATGTTTTATTCGCAGATACGTATAATCATAAAGCGGCTCATGGCCT    650

BSNT_06090___    651 TCGCTATATCGTCAATCCGCCTGACGCGCAAGTAACGGTTCACCAGCATT    700
                     ||||||.||||||||||||||||||||..|||||||||||||||||||||
BL00239___iol    651 TCGCTACATCGTCAATCCGCCTGACGCAAAAGTAACGGTTCACCAGCATT    700

BSNT_06090___    701 TGGACATTGGTCAAGGCGAGGTTGATTTTGATACGATTTTCAGAAAACTG    750
                     ||||||||||||||||||||||.||||||||||.|||.||||||||.|||
BL00239___iol    701 TGGACATTGGTCAAGGCGAGGTCGATTTTGATATGATCTTCAGAAAGCTG    750

BSNT_06090___    751 AGAGAGATGAAGTTCGACGGAATTGCGACGAATGCCGTATTTGCTTGGGT    800
                     ||||||||||||||||||||||||||||||||.|||||.|||||||||||
BL00239___iol    751 AGAGAGATGAAGTTCGACGGAATTGCGACGAACGCCGTTTTTGCTTGGGT    800

BSNT_06090___    801 CGATGAAAGAGCGGATGAATCAAGCCGATTTATGCTTAAGAAAATGAAAG    850
                     |||||||||||||||||||||||||.||||.||||||.|.|||.|||||.
BL00239___iol    801 CGATGAAAGAGCGGATGAATCAAGCAGATTCATGCTTGAAAAATTGAAAC    850

BSNT_06090___    851 AAGAATTAGGTCTGGCATAA    870
                     ||||||||  |..||| |||
BL00239___iol    851 AAGAATTA--TTAGGC-TAA    867


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