Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05771 and BL00235
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence pep-align/BSNT_05771___ywfE.1.5803.seq
# -bsequence pep-align/BL00235.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05771___ywfE-BL00235.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05771___ywfE-BL00235.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05771___ywfE
# 2: BL00235
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 526
# Identity: 111/526 (21.1%)
# Similarity: 184/526 (35.0%)
# Gaps: 155/526 (29.5%)
# Score: 199.0
#
#
#=======================================
BSNT_05771___ 1 --MERKTVLVIADLGGCPPHMFYKSAAEKYNL-VSFIPRPFAITASHAAL 47
...|.:.:|......| |....||:..| |:|.
BL00235 1 MTKRNKNLAIICQNKHLP---FIFEEAERLGLKVTFF------------- 34
BSNT_05771___ 48 IEKYSVAVIKDKDYFKSLADFEH--PDSIYWAHEDHNKPEEEVVEQIVKV 95
|:.| :|:..:|...|. |..:: || ||..::.:.:.
BL00235 35 ---YNSA----EDFPGNLPAVERCVPLPLF---ED----EEAAMDVVRQT 70
BSNT_05771___ 96 AEMFGADAITTNNELFIAPMAKACERLGLRGAGVQAAENARDKNKMRDAF 145
...|..|.:.|..|..:...|||.|.|.|.|......||.|:|||.|...
BL00235 71 FVEFPFDGVMTLFEPALPFTAKAAEALNLPGLPFTTMENCRNKNKTRSIL 120
BSNT_05771___ 146 NKAGVKSIKNKRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTE 195
.:.|:.:.......||.|... .::..||::||....||.||..:.|.:
BL00235 121 QQNGLNTPVFHEFHTLADLEN--RKLSYPLVVKPVNGFSSQGVVRVDDRK 168
BSNT_05771___ 196 TAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFLQG-EYGDWYQTEGYSD 244
..|:...:| :.:...::.:.|..:...:||:|:.| |:
BL00235 169 ELEEAVRKV-EAVNQRDLNRFVHGKTGIVAEQFIDGPEF----------- 206
BSNT_05771___ 245 YISIEGIMADGEYFPIAIHDKTPQIG--FTETSHITPSILDEEAKKKIVE 292
:||.:...|....::|..|....| |.|..:|.|:.|.||.:..||:
BL00235 207 --AIETLSIQGNVHVLSIGYKGNSKGPFFEEGVYIAPAQLKEETRLAIVK 254
BSNT_05771___ 293 AAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNI-KKV 341
....|...||:.....|||::|.|:..|.:||..||..|..:...| |:.
BL00235 255 EVTGAVSALGIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKES 304
BSNT_05771___ 342 FGLDMAQLLLDVLCFGKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIP 391
.|::..||:| ::|..| |....|:...:..
BL00235 305 TGINFMQLVL------QNALKP---------------LESSEFEGEIRPV 333
BSNT_05771___ 392 ETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFNSIAAF 441
.||.:.:|. ::|. || ||
BL00235 334 RTAGNYIIP--------VQGS-----------GT------FE-------- 350
BSNT_05771___ 442 ELKGSNSQDVAESIRQIQQHAKLTAKYVLPV------------------- 472
::.|.......:.::::.|..:..|| :||.
BL00235 351 KIDGLEEVKQRQEVKRVFQFMRRGAK-ILPYPHFSGYPGFILTSHHSYEE 399
BSNT_05771___ 472 -------------------------- 472
BL00235 400 CEAFYRELDDELHIIYQNNLTGTIGG 425
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