Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06045 and BL00228
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence pep-align/BSNT_06045___nupC.1.5803.seq
# -bsequence pep-align/BL00228___nupC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06045___nupC-BL00228___nupC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06045___nupC-BL00228___nupC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06045___nupC
# 2: BL00228___nupC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 336/393 (85.5%)
# Similarity: 372/393 (94.7%)
# Gaps: 0/393 ( 0.0%)
# Score: 1725.0
#
#
#=======================================
BSNT_06045___ 1 MKYLIGIIGLIVFLGLAWIASSGKKRIKIRPIVVMLILQFILGYILLNTG 50
||||||:|||.|.|||||:.||||||:|.||::||::|||.|||||||||
BL00228___nup 1 MKYLIGLIGLFVVLGLAWLVSSGKKRVKYRPVIVMIVLQFALGYILLNTG 50
BSNT_06045___ 51 IGNFLVGGFAKGFGYLLEYAAEGINFVFGGLVNADQTTFFMNVLLPIVFI 100
:||:|||||||||||||||||||:|||||||||.:::|||::||||||||
BL00228___nup 51 VGNYLVGGFAKGFGYLLEYAAEGVNFVFGGLVNVNESTFFISVLLPIVFI 100
BSNT_06045___ 101 SALIGILQKWKVLPFIIRYIGLALSKVNGMGRLESYNAVASAILGQSEVF 150
||||||||.|::|||||:||||||||:||||:||||||||||||||||||
BL00228___nup 101 SALIGILQYWRILPFIIKYIGLALSKINGMGKLESYNAVASAILGQSEVF 150
BSNT_06045___ 151 ISLKKELGLLNQQRLYTLCASAMSTVSMSIVGAYMTMLKPEYVVTALVLN 200
|||||:||||.:.|||||||||||||||||||||||||||||||||||||
BL00228___nup 151 ISLKKQLGLLPKHRLYTLCASAMSTVSMSIVGAYMTMLKPEYVVTALVLN 200
BSNT_06045___ 201 LFGGFIIASIINPYEVAKEEDMLRVEEEEKQSFFEVLGEYILDGFKVAVV 250
||||||||||||||||.:|.||:.|:|||||||||:|||||:||||||||
BL00228___nup 201 LFGGFIIASIINPYEVDREHDMVEVQEEEKQSFFEMLGEYIMDGFKVAVV 250
BSNT_06045___ 251 VAAMLIGFVAIIALINGIFNAVFGISFQGILGYVFAPFAFLVGIPWNEAV 300
|||||||||||||:|||||:|..|||||.:||::|||||||:||||:|||
BL00228___nup 251 VAAMLIGFVAIIAMINGIFSAALGISFQELLGFIFAPFAFLMGIPWHEAV 300
BSNT_06045___ 301 NAGSIMATKMVSNEFVAMTSLTQNGFHFSGRTTAIVSVFLVSFANFSSIG 350
||||||||||||||||||.||.|..|||||||.|||||||||||||||||
BL00228___nup 301 NAGSIMATKMVSNEFVAMQSLAQGSFHFSGRTEAIVSVFLVSFANFSSIG 350
BSNT_06045___ 351 IIAGAVKGLNEKQGNVVARFGLKLLYGATLVSFLSAAIVGLIY 393
||||||||||||||||||||||||||||||||||:|.:|||||
BL00228___nup 351 IIAGAVKGLNEKQGNVVARFGLKLLYGATLVSFLTATVVGLIY 393
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