Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05988 and BL00221
See
DNA alignment /
Visit
BSNT_05988 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence pep-align/BSNT_05988___deaD.1.5803.seq
# -bsequence pep-align/BL00221___deaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05988___deaD-BL00221___deaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05988___deaD-BL00221___deaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05988___deaD
# 2: BL00221___deaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 345/481 (71.7%)
# Similarity: 407/481 (84.6%)
# Gaps: 2/481 ( 0.4%)
# Score: 1801.0
#
#
#=======================================
BSNT_05988___ 1 --MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQT 48
.:.|::|.:|.||.:||:.|||.|||.||..||||.|:::|:||||:|
BL00221___dea 1 MSKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRT 50
BSNT_05988___ 49 GSGKTASFGIPLCELADWDENKPQALILTPTRELAVQVKEDITNIGRFKR 98
||||||:||||||||.:|:|||||||:||||||||.|||||:|||||:||
BL00221___dea 51 GSGKTAAFGIPLCELTEWEENKPQALVLTPTRELAAQVKEDLTNIGRYKR 100
BSNT_05988___ 99 IKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYL 148
|||.||:|||||::||.|||||.|||||.|||||||||||||||::|.||
BL00221___dea 101 IKAAAVYGKSSFERQKTELKQKCHIVVGPPGRVLDHIEKGTLPLEKLKYL 150
BSNT_05988___ 149 VIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPEDIEKLSRQYMQ 198
||||||||||||||:||.|||:|||.||.|||||||.|||:|.||.|||:
BL00221___dea 151 VIDEADEMLNMGFIDQVGAIIRHLPEERLTMLFSATFPEDVEHLSLQYMK 200
BSNT_05988___ 199 NPEHIEIKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCR 248
:|..|||||.|.||.:|||.:|.|.|.:.||||.|:.:.|||||||:|||
BL00221___dea 201 DPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVENPDSCIVFCR 250
BSNT_05988___ 249 TKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATD 298
|:|.||:|...|..|||||:||||||.|||||.|||.|:||.:|||:|||
BL00221___dea 251 TQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATD 300
BSNT_05988___ 299 VAARGIDIENISLVINYDLPVEKESYVHRTGRTGRAGNKGKAISFVTAFE 348
|||||||||||:.||||:||:::||||||||||||||::||||:..:|.|
BL00221___dea 301 VAARGIDIENITHVINYELPLDQESYVHRTGRTGRAGSRGKAITLASARE 350
BSNT_05988___ 349 KRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEE 398
||.:||||:||||.|..||.||:||:||.|..|..|:|.:||.|:||||.
BL00221___dea 351 KRMIADIEDYIGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSES 400
BSNT_05988___ 399 LNKDIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYV 448
|||:||:||||||||||:|||||||||||||||||:|||||||.:..|:|
BL00221___dea 401 LNKEIMRLYFNGGKKKKLRAVDFVGTIAKIDGVSAEDIGIITIQEQGSFV 450
BSNT_05988___ 449 EILNGKGPHVLKVMKNTTVKGKQLKVNKANK 479
||||||||.||..|||||||||.|||:||.|
BL00221___dea 451 EILNGKGPLVLDAMKNTTVKGKLLKVHKARK 481
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.