Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05153 and BL00204

See DNA alignment / Visit BSNT_05153 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence pep-align/BSNT_05153___yvfR.1.5803.seq
#    -bsequence pep-align/BL00204___yvfR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05153___yvfR-BL00204___yvfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05153___yvfR-BL00204___yvfR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05153___yvfR
# 2: BL00204___yvfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     197/300 (65.7%)
# Similarity:   242/300 (80.7%)
# Gaps:           2/300 ( 0.7%)
# Score: 1010.0
# 
#
#=======================================

BSNT_05153___      1 MKEVVTVSNVTKHFHRKTAVNHISFSIEKGEIAAILGPNGAGKTTVISMI     50
                     |..||:::||||.|.:||||:.|.|||:||||.||||||||||||.||||
BL00204___yvf      1 MSNVVSLTNVTKTFRQKTAVDQIDFSIKKGEIVAILGPNGAGKTTTISMI     50

BSNT_05153___     51 LGLLKPSEGEIKLFNRVPDDQQVREKIGVMLQEVSVMPGLKVDEILELFR    100
                     ||||||:.|.|.||:.:|.:::||||||.|||||||||||:..||:||.|
BL00204___yvf     51 LGLLKPTAGNITLFDSMPHEKRVREKIGTMLQEVSVMPGLRAGEIIELIR    100

BSNT_05153___    101 SYYPNPLSMKELVSLTALTKEDLKTRAEKLSGGQKRRLSFALALAGNPEL    150
                     ||||.|||.::|.:||.||.:||||:||||||||||||.|||||||:|||
BL00204___yvf    101 SYYPKPLSFQKLRTLTGLTDKDLKTQAEKLSGGQKRRLGFALALAGDPEL    150

BSNT_05153___    151 LILDEPTVGMDTSSRHRFWQTIHGLSDQGKTIIFSTHYLQEADDAAQRIL    200
                     :|.||||||||.:||:|||||:..|::|||||||||||||||||||||||
BL00204___yvf    151 MIFDEPTVGMDITSRNRFWQTVQSLAEQGKTIIFSTHYLQEADDAAQRIL    200

BSNT_05153___    201 FFTEGQLVADGSPMQIRSRIQKQSVSFTLHSSESVERLSCHPEVERVIHE    250
                     .|.:|::||||:|:||:|||.|.||||.:...:|:|:|..|||.|::..:
BL00204___yvf    201 LFKDGKIVADGTPLQIKSRISKHSVSFIVDPEQSLEKLYQHPETEQIFRK    250

BSNT_05153___    251 HERTIIQTSNTDKVLALIFQENIHARDIRIEQATLDEAFRQLADGNREAM    300
                     :.|..|.|:||||:|.|||.|.|.|.||:||:..|:||||||.....|  
BL00204___yvf    251 NNRVYIDTANTDKILELIFSEKIGAYDIQIERGNLEEAFRQLTSKGDE--    298


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