Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06142 and BL00194

See DNA alignment / Visit BSNT_06142 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_06142___gntR.1.5803.seq
#    -bsequence pep-align/BL00194___gntR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06142___gntR-BL00194___gntR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06142___gntR-BL00194___gntR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06142___gntR
# 2: BL00194___gntR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     208/243 (85.6%)
# Similarity:   226/243 (93.0%)
# Gaps:           0/243 ( 0.0%)
# Score: 1045.0
# 
#
#=======================================

BSNT_06142___      1 MLDSKDLLYPAKWLSKASTGVRVAYELRMRIVSGLIESGTILSENTIAAE     50
                     |.:||.||||.||||:||||||||.||||||:|||||||||||||.:|||
BL00194___gnt      1 MSESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAE     50

BSNT_06142___     51 FSVSRSPVREALKILASEKIIRLERMGAVVIGLTEKKIAEIYDVRLLLET    100
                     |||||||:||||||||||||||||||||||||||||:|.|||||||::||
BL00194___gnt     51 FSVSRSPIREALKILASEKIIRLERMGAVVIGLTEKEIGEIYDVRLVMET    100

BSNT_06142___    101 FVFERLVKIDIEPLVKDLSKILEMMKVSIKYEDADEFSFQDVLFHETIIR    150
                     ||||||.:.:::.||.|||||||||||||||:||||||||||||||||:|
BL00194___gnt    101 FVFERLGQANVDELVTDLSKILEMMKVSIKYKDADEFSFQDVLFHETIVR    150

BSNT_06142___    151 AIDHSYIQMIWNNLKPVMESFILLSMRVRLKEKYEDFTRILDNHELYIQA    200
                     :|:||||.|||||||||||||||||||.|||||||||.||||||||||||
BL00194___gnt    151 SINHSYILMIWNNLKPVMESFILLSMRARLKEKYEDFERILDNHELYIQA    200

BSNT_06142___    201 IKTKDRALMIQSLHQNFDDVQDKVEDLWLSQQMLAKGAEYNND    243
                     ||||||.||::||||||||||.|||||||||||||||||..||
BL00194___gnt    201 IKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQQND    243


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