Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06142 and BL00194
See
Amino acid alignment /
Visit
BSNT_06142 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_06142___gntR.1.5803.seq
# -bsequence dna-align/BL00194___gntR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06142___gntR-BL00194___gntR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06142___gntR-BL00194___gntR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06142___gntR
# 2: BL00194___gntR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity: 572/744 (76.9%)
# Similarity: 572/744 (76.9%)
# Gaps: 24/744 ( 3.2%)
# Score: 2189.5
#
#
#=======================================
BSNT_06142___ 1 ATGCTAGACTCCAAAGACCTGTTGTATCCCGCAAAATGGCTCTCAAAAGC 50
|||...||.||.||||.|||.||.|||||.|..||.|||||.||.|.|||
BL00194___gnt 1 ATGAGCGAATCTAAAGGCCTTTTATATCCGGAGAAGTGGCTTTCTAGAGC 50
BSNT_06142___ 51 GTCAACCGGAGTTCGTGTCGCATACGAGCTGAGAATGCGGATCGTTTCAG 100
.|||||.||.|||||.|||||||.|||||||||||||||.||..||||.|
BL00194___gnt 51 TTCAACTGGTGTTCGCGTCGCATGCGAGCTGAGAATGCGCATTATTTCCG 100
BSNT_06142___ 101 GCCTGATTGAAAGCGGTACCATTTTATCAGAAAATACAATCGCCGCCGAG 150
|..|||||||||||||||||||||||||.|||||||.|.|.||.||.||.
BL00194___gnt 101 GTTTGATTGAAAGCGGTACCATTTTATCTGAAAATAAATTGGCTGCGGAA 150
BSNT_06142___ 151 TTTTCAGTAAGCCGTTCGCCGGTTCGCGAAGCGCTAAAAATACTCGCATC 200
||.||.||.|||||.||.||..|.|||||.||..||||||||||.|||||
BL00194___gnt 151 TTCTCGGTGAGCCGGTCTCCCATCCGCGAGGCTTTAAAAATACTGGCATC 200
BSNT_06142___ 201 CGAAAAAATCATCCGCTTAGAACGAATGGGAGCGGTCGTAATTGGTTTAA 250
.||||||||||||||.||.|||||.|||||.||.||.||.||.|||||||
BL00194___gnt 201 GGAAAAAATCATCCGTTTGGAACGGATGGGGGCCGTTGTCATCGGTTTAA 250
BSNT_06142___ 251 CTGAGAAGAAAATCGCGGAAATTTATGATGTGC----GGTTACTATTAGA 296
|.||.||..||||.|..|||||||||||||||| |||.| |.||
BL00194___gnt 251 CCGAAAAAGAAATAGGAGAAATTTATGATGTGCGCCTGGTGA----TGGA 296
BSNT_06142___ 297 AACATTTGTCTTTGAACGGCTT------GTCAAAATAGACATTGAGCCTT 340
||||||.||.||.||||||||| |.|||..|.||| ||.|
BL00194___gnt 297 AACATTCGTATTCGAACGGCTTGGACAGGCCAATGTCGAC---GAAC--- 340
BSNT_06142___ 341 TAGTTAAGGATCTCAGCAAAATTCTTGAAATGATGAAAGTCTCAATCAAA 390
|.||.|..||.|||||||||||..|.||.||||||||||||||.||||||
BL00194___gnt 341 TGGTAACAGACCTCAGCAAAATATTGGAGATGATGAAAGTCTCCATCAAA 390
BSNT_06142___ 391 TATGAGGACGCTGACGAATTTTCATTTCAAGATGTGCTGTTCCATGAAAC 440
||..|.||.||.|||||.||.|||||||||||.||..|.||.||.|||||
BL00194___gnt 391 TACAAAGATGCCGACGAGTTCTCATTTCAAGACGTCTTATTTCACGAAAC 440
BSNT_06142___ 441 GATTATCCGAGCGATTGATCATTCATACATTCAGATGATCTGGAACAATC 490
||||.||||..|.||..|||||||.||||||..||||||.||||||||||
BL00194___gnt 441 GATTGTCCGCTCCATCAATCATTCTTACATTTTGATGATATGGAACAATC 490
BSNT_06142___ 491 TAAAACCCGTCATGGAAAGCTTTATTCTTTTATCGATGCGGGTACGGTTA 540
|.|||||.||.|||||||||||||||||||||||.|||||||..||.|||
BL00194___gnt 491 TCAAACCTGTGATGGAAAGCTTTATTCTTTTATCCATGCGGGCCCGCTTA 540
BSNT_06142___ 541 AAGGAAAAGTATGAAGACTTCACAAGGATTTTAGATAACCACGAGCTTTA 590
||.|||||.||.||||||||...|.|.|||.|.||||||||.||.|||||
BL00194___gnt 541 AAAGAAAAATACGAAGACTTTGAACGAATTCTCGATAACCATGAACTTTA 590
BSNT_06142___ 591 TATTCAAGCCATCAAAACAAAGGATAGGGCGCTGATGATTCAGTCTCTTC 640
|||||||||.||||||||.||.||.||||..||||||.||.|.||.||.|
BL00194___gnt 591 TATTCAAGCGATCAAAACGAAAGACAGGGATCTGATGCTTAAATCCCTAC 640
BSNT_06142___ 641 ACCAAAACTTTGATGATGTGCAGGATAAGGTAGAAGACCTATGGCTCTCA 690
|.|||||.||.|||||.||.||.|.|||.||.|||||.||||||||.||.
BL00194___gnt 641 ATCAAAATTTCGATGACGTACAAGGTAAAGTTGAAGATCTATGGCTGTCG 690
BSNT_06142___ 691 CAACAAATGCTGGCAAAAGGAGCTGAATACAAC--AATGACTAG 732
||||||||||||||.||||||||.|| ||||| |||||||||
BL00194___gnt 691 CAACAAATGCTGGCGAAAGGAGCCGA--ACAACAAAATGACTAG 732
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.