Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06142 and BL00194

See Amino acid alignment / Visit BSNT_06142 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_06142___gntR.1.5803.seq
#    -bsequence dna-align/BL00194___gntR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06142___gntR-BL00194___gntR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06142___gntR-BL00194___gntR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06142___gntR
# 2: BL00194___gntR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity:     572/744 (76.9%)
# Similarity:   572/744 (76.9%)
# Gaps:          24/744 ( 3.2%)
# Score: 2189.5
# 
#
#=======================================

BSNT_06142___      1 ATGCTAGACTCCAAAGACCTGTTGTATCCCGCAAAATGGCTCTCAAAAGC     50
                     |||...||.||.||||.|||.||.|||||.|..||.|||||.||.|.|||
BL00194___gnt      1 ATGAGCGAATCTAAAGGCCTTTTATATCCGGAGAAGTGGCTTTCTAGAGC     50

BSNT_06142___     51 GTCAACCGGAGTTCGTGTCGCATACGAGCTGAGAATGCGGATCGTTTCAG    100
                     .|||||.||.|||||.|||||||.|||||||||||||||.||..||||.|
BL00194___gnt     51 TTCAACTGGTGTTCGCGTCGCATGCGAGCTGAGAATGCGCATTATTTCCG    100

BSNT_06142___    101 GCCTGATTGAAAGCGGTACCATTTTATCAGAAAATACAATCGCCGCCGAG    150
                     |..|||||||||||||||||||||||||.|||||||.|.|.||.||.||.
BL00194___gnt    101 GTTTGATTGAAAGCGGTACCATTTTATCTGAAAATAAATTGGCTGCGGAA    150

BSNT_06142___    151 TTTTCAGTAAGCCGTTCGCCGGTTCGCGAAGCGCTAAAAATACTCGCATC    200
                     ||.||.||.|||||.||.||..|.|||||.||..||||||||||.|||||
BL00194___gnt    151 TTCTCGGTGAGCCGGTCTCCCATCCGCGAGGCTTTAAAAATACTGGCATC    200

BSNT_06142___    201 CGAAAAAATCATCCGCTTAGAACGAATGGGAGCGGTCGTAATTGGTTTAA    250
                     .||||||||||||||.||.|||||.|||||.||.||.||.||.|||||||
BL00194___gnt    201 GGAAAAAATCATCCGTTTGGAACGGATGGGGGCCGTTGTCATCGGTTTAA    250

BSNT_06142___    251 CTGAGAAGAAAATCGCGGAAATTTATGATGTGC----GGTTACTATTAGA    296
                     |.||.||..||||.|..||||||||||||||||    |||.|    |.||
BL00194___gnt    251 CCGAAAAAGAAATAGGAGAAATTTATGATGTGCGCCTGGTGA----TGGA    296

BSNT_06142___    297 AACATTTGTCTTTGAACGGCTT------GTCAAAATAGACATTGAGCCTT    340
                     ||||||.||.||.|||||||||      |.|||..|.|||   ||.|   
BL00194___gnt    297 AACATTCGTATTCGAACGGCTTGGACAGGCCAATGTCGAC---GAAC---    340

BSNT_06142___    341 TAGTTAAGGATCTCAGCAAAATTCTTGAAATGATGAAAGTCTCAATCAAA    390
                     |.||.|..||.|||||||||||..|.||.||||||||||||||.||||||
BL00194___gnt    341 TGGTAACAGACCTCAGCAAAATATTGGAGATGATGAAAGTCTCCATCAAA    390

BSNT_06142___    391 TATGAGGACGCTGACGAATTTTCATTTCAAGATGTGCTGTTCCATGAAAC    440
                     ||..|.||.||.|||||.||.|||||||||||.||..|.||.||.|||||
BL00194___gnt    391 TACAAAGATGCCGACGAGTTCTCATTTCAAGACGTCTTATTTCACGAAAC    440

BSNT_06142___    441 GATTATCCGAGCGATTGATCATTCATACATTCAGATGATCTGGAACAATC    490
                     ||||.||||..|.||..|||||||.||||||..||||||.||||||||||
BL00194___gnt    441 GATTGTCCGCTCCATCAATCATTCTTACATTTTGATGATATGGAACAATC    490

BSNT_06142___    491 TAAAACCCGTCATGGAAAGCTTTATTCTTTTATCGATGCGGGTACGGTTA    540
                     |.|||||.||.|||||||||||||||||||||||.|||||||..||.|||
BL00194___gnt    491 TCAAACCTGTGATGGAAAGCTTTATTCTTTTATCCATGCGGGCCCGCTTA    540

BSNT_06142___    541 AAGGAAAAGTATGAAGACTTCACAAGGATTTTAGATAACCACGAGCTTTA    590
                     ||.|||||.||.||||||||...|.|.|||.|.||||||||.||.|||||
BL00194___gnt    541 AAAGAAAAATACGAAGACTTTGAACGAATTCTCGATAACCATGAACTTTA    590

BSNT_06142___    591 TATTCAAGCCATCAAAACAAAGGATAGGGCGCTGATGATTCAGTCTCTTC    640
                     |||||||||.||||||||.||.||.||||..||||||.||.|.||.||.|
BL00194___gnt    591 TATTCAAGCGATCAAAACGAAAGACAGGGATCTGATGCTTAAATCCCTAC    640

BSNT_06142___    641 ACCAAAACTTTGATGATGTGCAGGATAAGGTAGAAGACCTATGGCTCTCA    690
                     |.|||||.||.|||||.||.||.|.|||.||.|||||.||||||||.||.
BL00194___gnt    641 ATCAAAATTTCGATGACGTACAAGGTAAAGTTGAAGATCTATGGCTGTCG    690

BSNT_06142___    691 CAACAAATGCTGGCAAAAGGAGCTGAATACAAC--AATGACTAG    732
                     ||||||||||||||.||||||||.||  |||||  |||||||||
BL00194___gnt    691 CAACAAATGCTGGCGAAAGGAGCCGA--ACAACAAAATGACTAG    732


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