Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06103 and BL00182

See DNA alignment / Visit BSNT_06103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_06103___iolR.1.5803.seq
#    -bsequence pep-align/BL00182___iolR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06103___iolR-BL00182___iolR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06103___iolR-BL00182___iolR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06103___iolR
# 2: BL00182___iolR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     214/254 (84.3%)
# Similarity:   237/254 (93.3%)
# Gaps:           3/254 ( 1.2%)
# Score: 1112.0
# 
#
#=======================================

BSNT_06103___      1 MKLMRIQEMEEYILSHGTVSLDELCQVFNVSKNTVRRDINKLTEKGAIEK     50
                     ||||||:|||:|||::||||||||||||||||||||||||||||||.|:|
BL00182___iol      1 MKLMRIKEMEDYILTNGTVSLDELCQVFNVSKNTVRRDINKLTEKGVIKK     50

BSNT_06103___     51 VYGGVTSIEKTALVPFENRTIQHQDEKTKIAHYASRFIEDHDLVFIDSGT    100
                     ||||||:||||||:||||||||::|.|||||.|||||||||||:||||||
BL00182___iol     51 VYGGVTAIEKTALIPFENRTIQNKDAKTKIARYASRFIEDHDLIFIDSGT    100

BSNT_06103___    101 TTKSILDTLDPAKNVTILTNSLDIINAASALKNINLIIIGNNYKRKTRSF    150
                     ||:|||:||||.||||:|||||||||||:|::||||||||:||||||:||
BL00182___iol    101 TTRSILETLDPNKNVTVLTNSLDIINAAAAMQNINLIIIGSNYKRKTQSF    150

BSNT_06103___    151 VGMDDPAMLDKYNINKAFMSATGTTLTHGLTNSDLLEYEIKKRISEKAKE    200
                     ||||||..|||||||||||||||.||||||||||||||||||:||||||:
BL00182___iol    151 VGMDDPGTLDKYNINKAFMSATGATLTHGLTNSDLLEYEIKKKISEKAKQ    200

BSNT_06103___    201 VYLLADHSKFGKSTLLTYAPFDRLHCIVTSQPLDDEYTQYCNEHQIGIHL    250
                     |||||||||||||||||||||||||.|||||.||:||..||.:.:|.|||
BL00182___iol    201 VYLLADHSKFGKSTLLTYAPFDRLHAIVTSQALDEEYHVYCKDRKIEIHL    250

BSNT_06103___    251 A---    251
                     |   
BL00182___iol    251 AKHV    254


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