Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04573 and BL00172

See DNA alignment / Visit BSNT_04573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_04573___yubF.1.5803.seq
#    -bsequence pep-align/BL00172___yubF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04573___yubF-BL00172___yubF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04573___yubF-BL00172___yubF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04573___yubF
# 2: BL00172___yubF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      76/87 (87.4%)
# Similarity:    80/87 (92.0%)
# Gaps:           1/87 ( 1.1%)
# Score: 383.0
# 
#
#=======================================

BSNT_04573___      1 MQKYRRRNTVAFTVLAYFTFFAGVFLFSIGLYNADNLELNEKGYYIAVMI     50
                     |.|||||||.||||::|||||||||||.|||||||||:||||||||||||
BL00172___yub      1 MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMI     50

BSNT_04573___     51 LVAVGAILTQKVTRDNAEDNEIIAEQEKRQNQSHIES     87
                     |||||||||||||||||||||||||||:|||.|..| 
BL00172___yub     51 LVAVGAILTQKVTRDNAEDNEIIAEQERRQNLSSGE-     86


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.