Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05106 and BL00168
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence pep-align/BSNT_05106___yvaQ.1.5803.seq
# -bsequence pep-align/BL00168___yvaQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05106___yvaQ-BL00168___yvaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05106___yvaQ-BL00168___yvaQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05106___yvaQ
# 2: BL00168___yvaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 607
# Identity: 192/607 (31.6%)
# Similarity: 324/607 (53.4%)
# Gaps: 80/607 (13.2%)
# Score: 726.5
#
#
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BSNT_05106___ 1 ------MRLTISRKFSLVF---LTLILINLLVGGIGVL-NMQHIIQKTDE 40
..:||..|:.::| ||..|.::|: ..|:| :....:|.|..
BL00168___yva 1 MKSPRWNNITIGGKYGIIFFVMLTAFLTSVLI-TYGLLKDTSQTVQDTKS 49
BSNT_05106___ 41 INTKWIDGIKEITSINYVTEHLSSKEKDFLIYTDKSKMDTLDQEMNQIME 90
.|...:...| :.|: |..::|...| .|:.
BL00168___yva 50 KNETAVQSAK-LMSL-YQNKYLHIPE--------------------YIIN 77
BSNT_05106___ 91 VINQKLDNYEKTIS--TDKEQKLFEQLQTEVNTYMDIHAQIIESGRTND- 137
..::||.:|.|... .|..:||.::|.:: ..:|:..||||:..:.|
BL00168___yva 78 AQDEKLTDYMKYSQEFADTAKKLKKELHSD--EQLDMFDQIIENNHSLDE 125
BSNT_05106___ 138 ---------------------MDKVRGLLVQTEASFEDMKKTI--TQLVD 164
..|...|..:|....|.:|:.. |.:..
BL00168___yva 126 YFFSEIVPNVQQINTEKFLTLQKKANKLKEETMTLGESLKENAVKTNVES 175
BSNT_05106___ 165 LNQEGSNTAVKETKAVYHKGLIYTALLVAASILISIFIWLYITRNIVKPI 214
:.|..||. ||.:|..|: ::|::| ::|..:.:.::|.|.|.:
BL00168___yva 176 IGQAQSNM----TKTIYILGV---SILISA--IVSAGLLIIVSRQIKKNL 216
BSNT_05106___ 215 IRMKESANHIAEGDLSNDMEPLNSKDELGDLNEALQKMVGNLRDIV---- 260
.|:..::..||:|.|:.:......|||:|.|::|:..|.|:||:::
BL00168___yva 217 KRVVAASEEIAKGHLNFEALDYKGKDEIGQLSQAVNHMGGSLREMIVEVS 266
BSNT_05106___ 261 GYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAEGSEQQAQDAV 310
|.:.::..:.|:.:.|.| :.|.||:.|..|:.|:|.|:..||.:|.
BL00168___yva 267 GIAAEVDKQCLTFTSVSA----DVREGSEQIAVTVEELANGATNQANEAA 312
BSNT_05106___ 311 TIAESMNEFTESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKT 360
.|:|...|.|..|..|:..|.|::..|:.||.::|.|::.||.||:||..
BL00168___yva 313 NISEQTQELTGQIQHAHESGETLARFSKEVLHVSVDGDKQMAQSLEQMNV 362
BSNT_05106___ 361 IHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLSLNAAIEAARA 410
|:|::|.:|.||..||:.:|.|:|||::|.|:|||||||:|||:||||||
BL00168___yva 363 INHVMEASVEKVSVLEEQTQSIHKLVEMITGMAEQTNLLALNASIEAARA 412
BSNT_05106___ 411 GESGKGFAVVADEVRKLADGVSDSVQDITRIVGGTQQEIHTVITYLESSF 460
|::||||||||.||::||:.|..||..||.||...|.|..::...|::.|
BL00168___yva 413 GDAGKGFAVVAGEVKRLAEEVKSSVGSITEIVTAIQTETSSMAGDLKTGF 462
BSNT_05106___ 461 TEVEKGTENLTDTGQAMRHIKQSVTHVADSIKEVTDGLKQLTNQSITINQ 510
:||.||...:..:|:....||..||.:|..:.::::.|......|..||.
BL00168___yva 463 SEVHKGKNQIETSGRYFSEIKNKVTDMAGRVSDISEALSHFRRSSEEING 512
BSNT_05106___ 511 SIENIASVSEESAAGIEE-TFSITEQSAYSMDQVLQNAEELEQLAKELNE 559
|:|:||::|||||||.|| :.|:.|||. |::::.::|..|.::.:.:|.
BL00168___yva 513 SVEHIAAISEESAAGSEEISASVHEQSG-SIEKMDESARLLGEMVERMNV 561
BSNT_05106___ 560 KMGQFTI 566
.:.:|.:
BL00168___yva 562 MIKRFKL 568
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