Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00744 and BL00146

See DNA alignment / Visit BSNT_00744 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00744___ydaP.1.5803.seq
#    -bsequence pep-align/BL00146___ydaP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00744___ydaP-BL00146___ydaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00744___ydaP-BL00146___ydaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00744___ydaP
# 2: BL00146___ydaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     434/574 (75.6%)
# Similarity:   498/574 (86.8%)
# Gaps:           1/574 ( 0.2%)
# Score: 2308.0
# 
#
#=======================================

BSNT_00744___      1 MAHKTAGQAMTELLEQWGVDHVYGIPGDSINEFIEELRHERNQLKFIQTR     50
                     ||:||||:...|||::|.:|||||:||||:||||:|||||.|.|:|||.|
BL00146___yda      1 MANKTAGKIAAELLKEWNIDHVYGMPGDSVNEFIDELRHEENSLRFIQVR     50

BSNT_00744___     51 HEEVAALAAAAEAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAI    100
                     |||.|||||||:||||||||||||||||||||||||||||||||||||||
BL00146___yda     51 HEETAALAAAADAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAI    100

BSNT_00744___    101 AGQVSSGEVGRDYFQEIKLEQMFEDVAVFNREVHSAESLPDLLNQAIRTA    150
                     .|||||.|:||||||||.||:||||||:||::|||||:||||||||||||
BL00146___yda    101 TGQVSSDEIGRDYFQEIGLERMFEDVALFNQQVHSAEALPDLLNQAIRTA    150

BSNT_00744___    151 YSKKGVAVLSVSDDLFAEKIKREPVYTSPVYIEGNLEPKKEQLVTCAQYI    200
                     ||:||.||||||||||||||||:|||||.:||||:|||||.||:.|||.|
BL00146___yda    151 YSQKGAAVLSVSDDLFAEKIKRKPVYTSALYIEGDLEPKKSQLMQCAQLI    200

BSNT_00744___    201 NNAKKPIILAGQGMKKAKRELLEFADKAAAPIVVTLPAKGVVPDKHPHFL    250
                     |.||||:||||:|||.|:.|||||||||||||:|||||||||||:|||.|
BL00146___yda    201 NQAKKPVILAGRGMKSARDELLEFADKAAAPIIVTLPAKGVVPDRHPHML    250

BSNT_00744___    251 GNLGQIGTKPAYEAMEECDLLIMLGTSFPYRDYLPDDTPAIQLDSDPAKI    300
                     ||||.||||||||||||.|||||||||||||||||:|.||||||::||||
BL00146___yda    251 GNLGHIGTKPAYEAMEESDLLIMLGTSFPYRDYLPEDAPAIQLDNNPAKI    300

BSNT_00744___    301 GKRYPVTAGLVCDSALGLRELTEYIERKEDRRFLNACTEHMQHWWNEIEK    350
                     |||||||||||||:..||.|||:.||||.:|.||.:|.:||:.|..|:||
BL00146___yda    301 GKRYPVTAGLVCDAKKGLFELTKTIERKSNRAFLESCIQHMRKWRYEVEK    350

BSNT_00744___    351 DETEATTPLKPQQVVARLQEAAADDAVLSVDVGTVTVWMARHFKMNANQD    400
                     ||..||.|||||||:|||::|.|||||||||||.||||.||||.| .|||
BL00146___yda    351 DEQVATEPLKPQQVIARLEDAVADDAVLSVDVGNVTVWTARHFNM-TNQD    399

BSNT_00744___    401 FIVSSWLATMGCGLPGAIAASLSEPERQAIAVCGDGGFSMVMQDLPTAVK    450
                     |::||||.||||||||||:|.||.||||.:||||||||||.|.|.|||||
BL00146___yda    400 FLISSWLGTMGCGLPGAISAKLSHPERQVVAVCGDGGFSMSMHDFPTAVK    449

BSNT_00744___    451 YKLPITVVILNNENLGMIEYEQQVKGNIDYVTKLQNVDYAAFAESCGAKG    500
                     |:|||.||||||:|||||:||||.||:::|.|.|:|||||.|||:||.||
BL00146___yda    450 YELPIVVVILNNQNLGMIQYEQQEKGHVNYATALENVDYAKFAEACGGKG    499

BSNT_00744___    501 IKVTKAEELAPAFHEALHSDQPVVVDVMIGNEPPLPGKITYGQAKGFSKY    550
                     ..|||.|||.||...|.||.:|.::||.|.:||||||||:|.||..:|||
BL00146___yda    500 FSVTKHEELIPALKSAFHSQKPSIIDVAIEDEPPLPGKISYTQAVNYSKY    549

BSNT_00744___    551 MLKNFFENQKIEMPSLKKSLKRLF    574
                     |:|...|.:::::|.|||||||:|
BL00146___yda    550 MIKKLVEKKELDLPPLKKSLKRIF    573


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00744 and BL00146

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
