Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00522 and BL00144

See DNA alignment / Visit BSNT_00522 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00522.1.5803.seq
#    -bsequence pep-align/BL00144.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00522-BL00144.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00522-BL00144.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: BL00144
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     139/288 (48.3%)
# Similarity:   181/288 (62.8%)
# Gaps:          24/288 ( 8.3%)
# Score: 628.5
# 
#
#=======================================

BSNT_00522         1 ----------------MTVQDICIHLGISRSSYYRWKKNLKKDHPKRHLE     34
                                     ..:.||...|||.:|:||||||..||.. ...||
BL00144            1 MEPRVIVQVVEELSATFKIIDILGVLGIPKSTYYRWKKKYKKVE-LTSLE     49

BSNT_00522        35 KQIGTLCREHQYRYGYRKITAILKKR--MCINHKTVQRIMQKNQWQCRVK     82
                     :.:..||:::.|.||:|||.:||.::  :.:|.||||:||||.:.||:||
BL00144           50 ELVIKLCKKNFYHYGHRKIKSILNRKYGINVNRKTVQKIMQKFEIQCQVK     99

BSNT_00522        83 VKKRKKN--GQPYAVVDNILDRNFQSDHPLEKLVTDITYLPYGQKQLYLS    130
                      |||:|.  |:...:|.|.|:|||::....||.||||||||||...||||
BL00144          100 -KKRQKYICGESNIIVPNTLNRNFKASRLNEKWVTDITYLPYGSTMLYLS    148

BSNT_00522       131 SILDVYNGEVIAFTIGDKQDTDLVLHTLDQLPTL--PENCVLHSDQGSVY    178
                     :|:|:||.|::|:.||..||.:|||.||.:...|  |...:|||||||||
BL00144          149 TIMDLYNNEIVAYKIGTSQDINLVLDTLREAVELRKPVGLLLHSDQGSVY    198

BSNT_00522       179 TSYEYQKAVKTKGITMSMSRKGTPADNASIESFHSSLKSETFYLNSIDRT    228
                     ||:.||...|.||||.||||||...|||.|||||||||||.|...|....
BL00144          199 TSHAYQNLAKEKGITTSMSRKGNCHDNAVIESFHSSLKSEGFNAQSRASI    248

BSNT_00522       229 TTAIVERTVIEYIHYYNNIRIQTKLNNQSPINYRQLAV    266
                     :.:.|.:.|.:|::.||::|||.|||..||:.||..|.
BL00144          249 SNSKVVQIVNQYMYRYNHVRIQAKLNYLSPLEYRGQAA    286


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