Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00522 and BL00144
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00522.1.5803.seq
# -bsequence dna-align/BL00144.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00522-BL00144.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00522-BL00144.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: BL00144
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 929
# Identity: 526/929 (56.6%)
# Similarity: 526/929 (56.6%)
# Gaps: 196/929 (21.1%)
# Score: 1273.0
#
#
#=======================================
BSNT_00522 1 -------------------------------ATGACCGTGCAG------- 12
|.||.|...|||
BL00144 1 TTGGAGCCACGAGTCATTGTCCAAGTTGTAGAAGAACTCTCAGCCACTTT 50
BSNT_00522 13 ---GATATCTG-TATTCAT------TTAGGTATCTCTCGCTCGTCTTATT 52
.|||..|| |||||.| |||||.||..||...||..|.||||
BL00144 51 TAAAATAATTGATATTCTTGGAGTATTAGGCATACCTAAGTCAACATATT 100
BSNT_00522 53 ATCGTTGGAAGAAGAA-TCTGAAGAAAGATCATCCCAAGCGCCATTTAGA 101
|.||||||||.||||| |.| ||.||||.|.| .|.|.|..|| |||||
BL00144 101 ACCGTTGGAAAAAGAAGTAT-AAAAAAGTTGA--GCTAACTTCA-TTAGA 146
BSNT_00522 102 AAAACAAATCGGCACGTTGTGCCGAG-AGCACCAGTATCGATATGGATAT 150
|.|.|.|.|...||.|.|||| ..|| |..||...||||..|||||..||
BL00144 147 AGAGCTAGTAATCAAGCTGTG-TAAGAAAAACTTCTATCACTATGGTCAT 195
BSNT_00522 151 CGAAAAATCACAGCTATATTAAA-AAAGAGAATG-------TGTATTAAC 192
||.|||||.|.|.|.||.||||| |.|.||.||| |||| |||
BL00144 196 CGTAAAATTAAATCCATCTTAAACAGAAAGTATGGGATAAATGTA--AAC 243
BSNT_00522 193 CATAAAACGGTTCAGCGTATTATGCAGAAA-------AATCAGTGGCAGT 235
|..|||||.||.||....|||||||| ||| |.||||||.||
BL00144 244 CGCAAAACTGTACAAAAAATTATGCA-AAAGTTTGAGATTCAGTGTCA-- 290
BSNT_00522 236 GCCGGGTTAAGGTGAAAAAGCG-CAAGAAGAATGGGCAGCCATATGCCGT 284
.||||| |||.||||| ||| |||.| |||.| ||
BL00144 291 ----AGTTAA---GAAGAAGCGACAA-AAGTA--------CATTT---GT 321
BSNT_00522 285 GGTCGACAAT-ATATTAGATAG----GA--ACTTTCAGTC-TGAT----- 321
||| ||.|.| ||||| ||.| || |||.|||.|| |.||
BL00144 322 GGT-GAGAGTAATATT--ATTGTGCCGAACACTCTCAATCGTAATTTTAA 368
BSNT_00522 322 ---CATCCTCT----TGAAAAACTAGTAACAGACATCACGTATTTGCCTT 364
.|.||..| |||||||...|||||.|||||.||.||.||.||||
BL00144 369 AGCAAGCCGATTAAATGAAAAATGGGTAACCGACATTACCTACTTACCTT 418
BSNT_00522 365 ATGGACAGAAACAA--TTGTACCTTTCCAGTATATTGGATGTATATAATG 412
||||...| ||.| ||.||..|.||.|..||..||||..|||||||..
BL00144 419 ATGGCTCG--ACTATGTTATATTTATCAACGATTATGGACTTATATAACA 466
BSNT_00522 413 GAGAAGTGATTGCTTTTACGATTGGAGATAAG---CAGGACACAGACCTT 459
..|||.|..|.||||..|..|| ||.||.| ||.||.|...||||.
BL00144 467 ACGAAATAGTGGCTTACAAAAT---AGGTACGAGCCAAGATATTAACCTA 513
BSNT_00522 460 GTCTTACACACACTTGATCAACTGCCAACACTGCCTG-AGAACTGCGT-- 506
||.|||.||||| |||| |..|| .||| ||||.|.|||
BL00144 514 GTATTAGACACA-TTGA------GGGAA-----GCTGTAGAATTACGTAA 551
BSNT_00522 507 ---------GTTA------CATAGTGACCAAGGATCTGTGTATACATCTT 541
|||| |||||.|||||.||||||||.|||||.||..
BL00144 552 ACCAGTAGGGTTACTTCTTCATAGCGACCAGGGATCTGTCTATACTTCAC 601
BSNT_00522 542 ACGAGTATCAGAAAGCTGTT-----AAAACAAAAGGCATTACCATGAGCA 586
|.|..|||||||| || |||..||||||||||||||..||||
BL00144 602 ATGCATATCAGAA-----TTTGGCCAAAGAAAAAGGCATTACCACAAGCA 646
BSNT_00522 587 TGTCCCGCAAAGGGACACCCGC--TGATAATGCCTCCATCGAATCGTTTC 634
||||.||.||||| .|.|.|| ||||||||||..|||.|||||.||||
BL00144 647 TGTCTCGAAAAGG--AAACTGCCATGATAATGCCGTCATTGAATCCTTTC 694
BSNT_00522 635 ATTCCTCACTAAAGTCTGA-------AACGTTCTATCTTAACAGCATTGA 677
|.|||||.||||||||.|| ||||.||.|..| |.|||||..|
BL00144 695 ACTCCTCGCTAAAGTCGGAAGGATTTAACGCTCAAAGT--AGAGCATCTA 742
BSNT_00522 678 TCGAACCACGACCGCCAT-----CGTAGAACGCACTGTCATAGAATACAT 722
| |.||| || .||||.||..|.|||.|...|||||||
BL00144 743 T--ATCCA--------ATTCTAAAGTAGTACAAATTGTAAATCAATACAT 782
BSNT_00522 723 TCATTATTATAACAATATTCGTATTCAAACGAAACTAAACAACCAATCAC 772
..||...|||||..||.|.||.|||||..|.|||.|||||.|||..||.|
BL00144 783 GTATCGATATAATCATGTACGAATTCAGGCAAAATTAAACTACCTGTCCC 832
BSNT_00522 773 CGATAAATTATCGGCAATTGGCTGTTTAA 801
|..|..|.||..||..|..|||.|..||.
BL00144 833 CACTGGAATACAGGGGACAGGCAGCATAG 861
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