Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00736 and BL00141
See
DNA alignment /
Visit
BSNT_00736 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence pep-align/BSNT_00736___ydaF.1.5803.seq
# -bsequence pep-align/BL00141___ydaF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00736___ydaF-BL00141___ydaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00736___ydaF-BL00141___ydaF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00736___ydaF
# 2: BL00141___ydaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 75/185 (40.5%)
# Similarity: 107/185 (57.8%)
# Gaps: 4/185 ( 2.2%)
# Score: 359.5
#
#
#=======================================
BSNT_00736___ 1 MFTCKVNEHITIRLLEPNDAERLAELIIQNQQRLSQWLFWAENPSS-ADT 49
||...|.:.:.:::|||.||..:...|.|::..|.:||||.:.... .||
BL00141___yda 1 MFKLMVRDDLYLKMLEPKDARAVYMQIQQSKDVLRKWLFWVDGTKQLEDT 50
BSNT_00736___ 50 YRETIIPEWRHQYADLNGIEAGLLYDGSLCGMISLHNLDQVNRKAEIGYW 99
|..|.|...|.|..||.:||:.:.|...|:|.||.::.:||...||||
BL00141___yda 51 --EAFIEESMKQAAANNGFQAGIWHQGQFAGIIGLHYINWINRTTSIGYW 98
BSNT_00736___ 100 IAKDFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIG 149
:.:.|:|||::|.|||.||...|.|.:|||:.|.|||.|.||:|:|||:|
BL00141___yda 99 LGEPFQGKGMMTDACRALIDTLFSEYDLNRIEIRAAVQNVKSQAIPERLG 148
BSNT_00736___ 150 FLEEGRARDGLYVNGRHHDLVYYSLLKREWEGEK- 183
|.:||..|...:::....|...|.|||.|:|...
BL00141___yda 149 FTKEGCLRQCEWLHDHFADHFVYGLLKEEYEARSK 183
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.