Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05743 and BL00136
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence pep-align/BSNT_05743___thrZ.1.5803.seq
# -bsequence pep-align/BL00136___thrZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05743___thrZ-BL00136___thrZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05743___thrZ-BL00136___thrZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05743___thrZ
# 2: BL00136___thrZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 462/639 (72.3%)
# Similarity: 555/639 (86.9%)
# Gaps: 1/639 ( 0.2%)
# Score: 2518.0
#
#
#=======================================
BSNT_05743___ 1 MSKH-VHIQLPDGQIKEYPKGITIKEAAGSISSSLQKKAAAGQVNGKLVD 49
||:. :.:|..:|..||:|||||||..|.|||::|:|.|...:|:.|.||
BL00136___thr 1 MSESLIKVQFKEGNTKEFPKGITIKRIAESISTTLRKHAVVAKVDEKFVD 50
BSNT_05743___ 50 LSFKLEEDAELSIVTLDSQEGLQVLRHTSAHVLAQAVKRLYGEVSLGVGP 99
||:.|::|.:|.|.||||:|||.||||||.|:||.||||||..||||:||
BL00136___thr 51 LSYTLDKDVKLDIFTLDSKEGLSVLRHTSTHILAHAVKRLYSSVSLGIGP 100
BSNT_05743___ 100 VIEDGFYYDMKLGKSLASGDLEAIEKEMKNIINENLEIKRIEVSYEEADE 149
||||.|:||:||..||:..||.|||:||:.||.||:|||||.||||||::
BL00136___thr 101 VIEDEFFYDLKLEHSLSPEDLLAIEREMEKIIKENIEIKRIVVSYEEAEK 150
BSNT_05743___ 150 LFAQKDERLKLEILKDIPRGEDITLYQQGEFVDLCRGPHLPSTGMIKAFK 199
||.:.:|.||||||:.||:|::|||||||||:||||||||||||.|||||
BL00136___thr 151 LFEENNEPLKLEILRGIPKGQEITLYQQGEFIDLCRGPHLPSTGFIKAFK 200
BSNT_05743___ 200 LTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLEEAAKRDHRKL 249
|||||||||||:.:.|||||||||||:||.||:.:|:.||:|||.|||:|
BL00136___thr 201 LTRVSGAYWRGNRQKEVLQRVYGVAFKKKDDLNEYLYFLEQAAKHDHRQL 250
BSNT_05743___ 250 GKQLGLFMFSEEAPGMPFYLPKGQIVRNELERFSRELQTNAGYNEVRTPF 299
||||.||||||||||||||||||||||.|||:.|||||.||.|:||.|||
BL00136___thr 251 GKQLDLFMFSEEAPGMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTPF 300
BSNT_05743___ 300 MMNQRLWEQSGHWDHYRDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYS 349
|||.||||:|||||||::||||||||:|:||:||||||||||||||:|||
BL00136___thr 301 MMNYRLWEKSGHWDHYQENMYFSEVDNTKFAIKPMNCPGHMLIFKNNLYS 350
BSNT_05743___ 350 YRDLPIRMAEFGQVHRHEYSGALNGMLRVRTFCQDDAHIFVREDQIESEI 399
|||||||:||:|||||||:||:|||:||||||||||||||||||||||||
BL00136___thr 351 YRDLPIRLAEYGQVHRHEFSGSLNGLLRVRTFCQDDAHIFVREDQIESEI 400
BSNT_05743___ 400 KEAIRLIDEVYRTFGFEYSVELSTRPEDSLGNDSLWEASERALARVLEEL 449
|:...|||:||||.||||||||||||:|||||:.|||.||.:|..||::|
BL00136___thr 401 KKVFHLIDQVYRTIGFEYSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDL 450
BSNT_05743___ 450 GLSYEINEGDGAFYGPKIDFHIKDALKRSHQCATIQLDFQMPEKFDLTYI 499
.:.|::||||||||||||||||||||||||||.|||||||||||||||||
BL00136___thr 451 AIKYQVNEGDGAFYGPKIDFHIKDALKRSHQCGTIQLDFQMPEKFDLTYI 500
BSNT_05743___ 500 NEHNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPVWLAPLQVQIIPVS 549
|.:||||||||||||:||||||||||||||:.|.|||||||:||||||:|
BL00136___thr 501 NHNNEKVRPVVIHRAIFGSIDRFFGILIEHFAGVFPVWLAPIQVQIIPIS 550
BSNT_05743___ 550 HVHLDYCRKVQAELKQAGIRAGIDERNEKLGYKIRESQVQKIPYVLVLGD 599
|:||:||..:::||||.|||..|:|.|:||||||||:|||||||.||:||
BL00136___thr 551 HIHLEYCLGIKSELKQHGIRVQINESNQKLGYKIREAQVQKIPYTLVVGD 600
BSNT_05743___ 600 HEEQENAVNVRRFGHQQSEHVPFQTFKDKLVKQVENRGM 638
:|.:||.||||::|.:|.::|..::||..:::|::.|.:
BL00136___thr 601 NEIKENGVNVRKYGEEQQKNVSIESFKKNILQQIKTRSV 639
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