Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00372 and BL00132

See DNA alignment / Visit BSNT_00372 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00372.1.5803.seq
#    -bsequence pep-align/BL00132___ybyB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00372-BL00132___ybyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00372-BL00132___ybyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00372
# 2: BL00132___ybyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      35/89 (39.3%)
# Similarity:    54/89 (60.7%)
# Gaps:          14/89 (15.7%)
# Score: 165.0
# 
#
#=======================================

BSNT_00372         1 MKQKLLLSGLAVSTVGITSYLLKDPSNRQKAREFIHSMKMKI---TKQPD     47
                     ||||.|:||||| ..|:|:|:|||.:||||.:.::.::|.||   :::.:
BL00132___yby      1 MKQKNLISGLAV-VAGVTAYMLKDETNRQKLKSYLQNVKEKIPYFSEKHN     49

BSNT_00372        48 METFPVDKAGHPDPQDSFRRLHVSRPILR----------     76
                     :::|||:|||||.|.|......||...:.          
BL00132___yby     50 VDSFPVEKAGHPSPHDIEDNKMVSEGSMYPVQYYDEKKK     88


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