Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05549 and BL00120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence pep-align/BSNT_05549___ywpE.1.5803.seq
# -bsequence pep-align/BL00120___ywpE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05549___ywpE-BL00120___ywpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05549___ywpE-BL00120___ywpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05549___ywpE
# 2: BL00120___ywpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 75/211 (35.5%)
# Similarity: 86/211 (40.8%)
# Gaps: 110/211 (52.1%)
# Score: 395.0
#
#
#=======================================
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 1 MYKKMIVAVLVISGILFVLSPFIKESIIINLNKNKNFDLTAEQAEQNNAQ 50
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 51 KASFDFEAIQPPSILETIKASLDRESKAVIGRITISSVNLKLPILKGTTN 100
BSNT_05549___ 1 ---------MRPDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVIT 41
||||||||||||||||||:|:::||||||.||:.|..:.||
BL00120___ywp 101 QNLLYGATTMRPDQKMGEGNYPLAGHHMKRESLLFGPLLNIEKGDTVKIT 150
BSNT_05549___ 42 DFKKDYIYSVTSKDIISEMDADVIEETNKKEITLITCDKAVKTEGRLVVK 91
||||||||:||||..|||||.|||:||.|||||||||||||:|||||.||
BL00120___ywp 151 DFKKDYIYAVTSKQFISEMDTDVIQETKKKEITLITCDKAVRTEGRLAVK 200
BSNT_05549___ 92 GELVDSFGHTN 102
|:|:....|.
BL00120___ywp 201 GKLIHVAVHR- 210
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