Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05549 and BL00120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence dna-align/BSNT_05549___ywpE.1.5803.seq
# -bsequence dna-align/BL00120___ywpE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05549___ywpE-BL00120___ywpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05549___ywpE-BL00120___ywpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05549___ywpE
# 2: BL00120___ywpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 226/642 (35.2%)
# Similarity: 226/642 (35.2%)
# Gaps: 342/642 (53.3%)
# Score: 779.0
#
#
#=======================================
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 1 ATGTATAAAAAAATGATCGTTGCCGTGCTTGTCATATCAGGAATACTCTT 50
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 51 CGTCTTGTCTCCTTTCATTAAAGAAAGCATCATCATCAATCTCAACAAGA 100
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 101 ATAAAAATTTTGATTTGACTGCTGAACAGGCGGAACAAAACAATGCACAA 150
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 151 AAGGCTTCATTTGATTTTGAGGCGATTCAGCCGCCTTCTATTTTGGAAAC 200
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 201 AATAAAAGCCAGCCTCGATCGTGAATCAAAAGCGGTCATCGGCCGGATCA 250
BSNT_05549___ 0 -------------------------------------------------- 0
BL00120___ywp 251 CCATAAGCAGCGTCAATCTCAAGCTTCCGATATTGAAGGGCACAACCAAT 300
BSNT_05549___ 1 ---------------------------ATGCGCCCGGATCAAAAAATGGG 23
|||||.||.|||||.||||||||
BL00120___ywp 301 CAAAATCTTCTTTACGGAGCGACAACAATGCGACCCGATCAGAAAATGGG 350
BSNT_05549___ 24 TGAGGGAAATTATCCGTTGGCGGGCCATCATTTGAAGCAAAAGAATCTTC 73
.||.||.||.||.|||.||||.|||||||||.||||||...|||..||..
BL00120___ywp 351 CGAAGGCAACTACCCGCTGGCAGGCCATCATATGAAGCGGGAGAGCCTCT 400
BSNT_05549___ 74 TGTTCGGACCTCTGGAAAACAT---AAAAACAGGTGCC--CAAATTGTCA 118
|.|||||.||.||....||||| ||||..||.|.|| .||| |
BL00120___ywp 401 TATTCGGTCCCCTTCTCAACATTGAAAAAGGAGATACCGTTAAA-----A 445
BSNT_05549___ 119 TCACGGATTTTAAAAAGGATTATATCTATTCTGTAACATCTAAAGACATC 168
||||.||.||||||||.||.|||||.||..||||.||.||.|||.|..||
BL00120___ywp 446 TCACAGACTTTAAAAAAGACTATATATACGCTGTGACGTCGAAACAATTC 495
BSNT_05549___ 169 ATATCGGAAATGGATGCAGATGTAATTGAGGAGACAAACAAAAAAGAGAT 218
||.||.||||||||..|||||||.|||.|.|||||.||.|||||.||.||
BL00120___ywp 496 ATTTCTGAAATGGACACAGATGTGATTCAAGAGACGAAAAAAAAGGAAAT 545
BSNT_05549___ 219 TACGCTAATCACATGTGACAAGGCTGTCAAAACTGAAGGGCGCCTTGTTG 268
|||.||.||.|||||||||||.|||||.|.|||.|||||.|||||||.||
BL00120___ywp 546 TACACTGATTACATGTGACAAAGCTGTGAGAACCGAAGGACGCCTTGCTG 595
BSNT_05549___ 269 TGAAAGGGGAATTGGTTGATTCTTTTGGCCATACA-AATTAA 309
|.|||||..| |.||||||.|.|.||..|||| |..|||
BL00120___ywp 596 TCAAAGGAAA----GCTGATTCATGTTGCTGTACACAGATAA 633
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