Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06288 and BL00110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_06288___trmE.1.5803.seq
# -bsequence pep-align/BL00110___trmE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06288___trmE-BL00110___trmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06288___trmE-BL00110___trmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06288___trmE
# 2: BL00110___trmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 405/459 (88.2%)
# Similarity: 441/459 (96.1%)
# Gaps: 0/459 ( 0.0%)
# Score: 2065.0
#
#
#=======================================
BSNT_06288___ 1 MDTIAAISTPMGEGAIAIVRLSGPEAIQIADKIYKGPKGKTLSSVESHTI 50
||||||||||||||||||||:|||||:.||||:||||:||.||||:||||
BL00110___trm 1 MDTIAAISTPMGEGAIAIVRMSGPEALAIADKVYKGPRGKRLSSVDSHTI 50
BSNT_06288___ 51 HYGHIVDRPSDRVVEEVMVSVLKAPRTFTREDVIEINCHGGIVTVNQVLQ 100
:||||||..:::|||||||||||||:||||||::|||||||:||||||||
BL00110___trm 51 NYGHIVDPETEKVVEEVMVSVLKAPKTFTREDIVEINCHGGLVTVNQVLQ 100
BSNT_06288___ 101 LALREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMN 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BL00110___trm 101 LVLREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMN 150
BSNT_06288___ 151 QMEGRLSALVRRLRSEILETLAHVEVNIDYPEYDDVEEMTHQILVEKATA 200
|||||||:|::|||:||||||||||||||||||||||||||::|:||||.
BL00110___trm 151 QMEGRLSSLIKRLRAEILETLAHVEVNIDYPEYDDVEEMTHKMLIEKATK 200
BSNT_06288___ 201 VKKEIEALLRTSEQGKILREGLSTVIIGRPNVGKSSLLNSLVHEAKAIVT 250
|||||||||.|||||||||||:||||||||||||||||||||||.|||||
BL00110___trm 201 VKKEIEALLTTSEQGKILREGISTVIIGRPNVGKSSLLNSLVHETKAIVT 250
BSNT_06288___ 251 DIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKE 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00110___trm 251 DIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKE 300
BSNT_06288___ 301 ADLILLVLNYSEELSEEDVKLFEAVEGMDVIVILNKTDLEAKIDTERVRE 350
||||||||||||.||:||:|||||.:|||:|||:||||||.|:|.:||||
BL00110___trm 301 ADLILLVLNYSESLSDEDIKLFEATKGMDIIVIVNKTDLEQKLDLDRVRE 350
BSNT_06288___ 351 LANGRPVVTTSLLKEEGINDLEEAIQSLFYTGAIESGDLTYVSNTRHISI 400
||..:|||||||||||||::|||||||||:|||||||||||||||||||:
BL00110___trm 351 LAGNQPVVTTSLLKEEGIDELEEAIQSLFFTGAIESGDLTYVSNTRHISL 400
BSNT_06288___ 401 LQQAKRAIEDALSGIEQDVPIDMVQIDLTRCWELLGEIIGDSVHESLIDQ 450
|.:|||||.|||.|||.||||||||||||||||:|||||||:||||||||
BL00110___trm 401 LHEAKRAITDALEGIENDVPIDMVQIDLTRCWEVLGEIIGDAVHESLIDQ 450
BSNT_06288___ 451 LFSQFCLGK 459
|||||||||
BL00110___trm 451 LFSQFCLGK 459
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