Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06287 and BL00109
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_06287___gidA.1.5803.seq
# -bsequence pep-align/BL00109___gidA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06287___gidA-BL00109___gidA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06287___gidA-BL00109___gidA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06287___gidA
# 2: BL00109___gidA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 628
# Identity: 581/628 (92.5%)
# Similarity: 609/628 (97.0%)
# Gaps: 0/628 ( 0.0%)
# Score: 3013.0
#
#
#=======================================
BSNT_06287___ 1 MGYEAGQYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNP 50
||||||||||:|:|||||||||||||||||||||||||||||||||||||
BL00109___gid 1 MGYEAGQYDVVVVGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNP 50
BSNT_06287___ 51 SVGGPAKGIVVREIDALGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQA 100
|||||||||||||||||||||.:||||||||||:||||||||||||||||
BL00109___gid 51 SVGGPAKGIVVREIDALGGEMAKNIDKTHIQMRLLNTGKGPAVRALRAQA 100
BSNT_06287___ 101 DKFQYQHEMKNTLEKEPNLTLLQGIVERLIVEDGECRGVITQTGAHYRAK 150
||||||||||.|||.|||||:|||:||||::||||||||||||||.||:|
BL00109___gid 101 DKFQYQHEMKKTLENEPNLTMLQGMVERLLIEDGECRGVITQTGAEYRSK 150
BSNT_06287___ 151 AVVMTTGTYLRGRIILGDLSYSSGPNNQQPSIKLSEHLEELGFDLVRFKT 200
.||:||||:|||:|||||||||||||||||||||||||||||||||||||
BL00109___gid 151 TVVLTTGTFLRGKIILGDLSYSSGPNNQQPSIKLSEHLEELGFDLVRFKT 200
BSNT_06287___ 201 GTPPRVKSDTIDYSKTEIQPGDDVPRAFSYETVEYITDQLPCWLTYTSPE 250
||||||.|.:||||||||||||:|||||||||||||||||||||||||||
BL00109___gid 201 GTPPRVNSHSIDYSKTEIQPGDEVPRAFSYETVEYITDQLPCWLTYTSPE 250
BSNT_06287___ 251 THEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPE 300
||||||:|||||||||||||||||||||||||||||||||||||||||||
BL00109___gid 251 THEIIDNNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPE 300
BSNT_06287___ 301 GRNTQEVYVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVP 350
|||||||||||||||||||||::||:||||||||||||||||||||||||
BL00109___gid 301 GRNTQEVYVQGLSTSLPEDVQRKMLSTIPGLENVQMMRAGYAIEYDAIVP 350
BSNT_06287___ 351 TQLWPTLETKKITNLYTAGQINGTSGYEEAAGQGIMAGINAGRKALGKEE 400
||||||||||||..|:||||||||||||||||||||||||||||||||||
BL00109___gid 351 TQLWPTLETKKIPGLFTAGQINGTSGYEEAAGQGIMAGINAGRKALGKEE 400
BSNT_06287___ 401 VILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTE 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00109___gid 401 VILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTE 450
BSNT_06287___ 451 IGHRIGLISDERYAAFEKKKAAIEAEKKRLHSVIIKPSPENQEYIRSLGG 500
||::|||||:|||..|::|||||||||||||||||||:.|||||||||||
BL00109___gid 451 IGYQIGLISEERYQKFQEKKAAIEAEKKRLHSVIIKPTKENQEYIRSLGG 500
BSNT_06287___ 501 SELKDGVRGTDLMKRPEMNYETVTKLAPPEVPVPQDVAEQVEIQVKYEGY 550
||||||:|.|||||||||||||||.|||||..|..|||||||||:|||||
BL00109___gid 501 SELKDGIRATDLMKRPEMNYETVTALAPPEQKVAGDVAEQVEIQIKYEGY 550
BSNT_06287___ 551 IEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQA 600
||||||||||||||||||||||||||||||||||||||||.|||||||||
BL00109___gid 551 IEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQA 600
BSNT_06287___ 601 SRISGVNPADISILLVYLEQGRIAKIAE 628
|||||||||||||||||||||||||:||
BL00109___gid 601 SRISGVNPADISILLVYLEQGRIAKVAE 628
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