Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06286 and BL00108
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_06286___gidB.1.5803.seq
# -bsequence pep-align/BL00108___gidB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06286___gidB-BL00108___gidB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06286___gidB-BL00108___gidB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: BL00108___gidB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 192/239 (80.3%)
# Similarity: 219/239 (91.6%)
# Gaps: 0/239 ( 0.0%)
# Score: 1011.0
#
#
#=======================================
BSNT_06286___ 1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEV 50
||||:||:||.:||||||..||||||.||:.|||||||:|||||||||||
BL00108___gid 1 MNIEQFTAGLEKKGISLSSFQLEQFETYYEWLVEWNEKMNLTSITEKKEV 50
BSNT_06286___ 51 YLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVD 100
|||||||||.|:|||||.::||:|||||||||||||||||||||:|||||
BL00108___gid 51 YLKHFYDSIAASFYVDFKKMNTLCDVGAGAGFPSLPIKICFPHLHVTIVD 100
BSNT_06286___ 101 SLNKRITFLEKLSEALQLENTTYCHDRAETFGQRKDVRESYDIVTARAVA 150
||||||.||.:||:||:||||.:.||||||||:.||.|||||:|||||||
BL00108___gid 101 SLNKRIHFLNQLSDALKLENTAFYHDRAETFGRSKDHRESYDVVTARAVA 150
BSNT_06286___ 151 RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS 200
|||||||||||||||:|||||||||||:||:..|||||.||||::|.:||
BL00108___gid 151 RLSVLSELCLPLVKKDGLFVALKAASADEEIETGKKAIKTLGGKIETVHS 200
BSNT_06286___ 201 FKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIEG 239
|:||||||:|||:||:|...||||:||||||||||||||
BL00108___gid 201 FQLPIEESERNIIVIKKQSQTPKKFPRKPGTPNKSPIEG 239
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