Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06286 and BL00108
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_06286___gidB.1.5803.seq
# -bsequence dna-align/BL00108___gidB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06286___gidB-BL00108___gidB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06286___gidB-BL00108___gidB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: BL00108___gidB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 731
# Identity: 564/731 (77.2%)
# Similarity: 564/731 (77.2%)
# Gaps: 22/731 ( 3.0%)
# Score: 2096.0
#
#
#=======================================
BSNT_06286___ 1 ATGAATATTGAAGAATTTACTTCTGGTTTGGCGGAAAAAGGGATCTCCCT 50
|||||.|||||..|||||||..|.|||||||.|.|.|||||.||.|||||
BL00108___gid 1 ATGAACATTGAGCAATTTACAGCCGGTTTGGAGAAGAAAGGCATTTCCCT 50
BSNT_06286___ 51 TTCTCCCCGT-CAGCTAGAGCAATTTGAG-CTGTATTACGACAT-GCTGG 97
||| |.||.| |||||.|||||||||||| || |||||||| || |||.|
BL00108___gid 51 TTC-CTCCTTCCAGCTGGAGCAATTTGAGACT-TATTACGA-ATGGCTTG 97
BSNT_06286___ 98 TTGAATGGAACGAAAAAATCAATCTGACTTCAATAACAGAGAAAAAAGAA 147
|||||||||||||||||||.|||.|.||.||.||.||.||||||||||||
BL00108___gid 98 TTGAATGGAACGAAAAAATGAATTTAACCTCGATTACCGAGAAAAAAGAA 147
BSNT_06286___ 148 GTGTATTTAAAGCATTTTTATGATTCCATTACAGCTGCTTTTTATGTCGA 197
|||||.||||||||||||||.||||||||..|.||..||||||||||.||
BL00108___gid 148 GTGTACTTAAAGCATTTTTACGATTCCATCGCCGCCTCTTTTTATGTTGA 197
BSNT_06286___ 198 CTTCAATCAGGTGAACACGATTTGTGATGTCGGAGCGGGAGCGGGTTTTC 247
.|||||..||.|||||||..|.||||||||.||||||||.||.||.||||
BL00108___gid 198 TTTCAAAAAGATGAACACTCTCTGTGATGTTGGAGCGGGTGCCGGATTTC 247
BSNT_06286___ 248 CAAGTCTGCCGATAAAAATATGCTTTCCGCACCTCAATGTCACAATCGTA 297
||||.||.|||||.|||||.||||||||.|||||..|.|||||||||||.
BL00108___gid 248 CAAGCCTTCCGATTAAAATCTGCTTTCCTCACCTTCACGTCACAATCGTT 297
BSNT_06286___ 298 GATTCACTGAATAAACGGA-TCACGTTTTTAGAA-AAGCTATCTGAGGCT 345
||.||||||||.||||||| |||| ||||.||| .||||.||.||.|||
BL00108___gid 298 GACTCACTGAACAAACGGATTCAC--TTTTTGAATCAGCTGTCAGACGCT 345
BSNT_06286___ 346 TTGCAATTGGAGAATACAACATACTGCCATGACAGAGCTGAAACGTTCGG 395
|||.|..||||.||.|||.|.|..|.|||||||.|.||.|||||.|||||
BL00108___gid 346 TTGAAGCTGGAAAACACAGCTTTTTACCATGACCGCGCGGAAACATTCGG 395
BSNT_06286___ 396 GCAACGGAAAGACGTGCGTGAAAGCTATGATATTGTGACAGCGCGAGCAG 445
...|..|||||||....|.|||||||||||..|||||||.||.||.||.|
BL00108___gid 396 AAGATCGAAAGACCACAGAGAAAGCTATGACGTTGTGACGGCACGCGCTG 445
BSNT_06286___ 446 TTGCGAGATTATCTGTTTTGAGTGAGCTTTGCTTGCCTCTGGTGAAGAAA 495
|.||..|..|.||.|||.|.||.|||||.|||.|.||.||.|||||.|||
BL00108___gid 446 TCGCCCGCCTTTCGGTTCTCAGCGAGCTCTGCCTTCCGCTTGTGAAAAAA 495
BSNT_06286___ 496 AACGGTTTATTTGTTGCTTTAAAAGCCGCATCAGCGGAAGAAG-AACTGA 544
.||||||||||.||.||.|||||||||||.||.||.||.|||| ||.|||
BL00108___gid 496 GACGGTTTATTCGTAGCATTAAAAGCCGCTTCGGCTGATGAAGAAATTGA 545
BSNT_06286___ 545 ATGCAGGCAAAAAAGCAATCACGACGCTTGGAGGAGAACTTGAGAATATC 594
| .|.|||||||||||.||||..|||||||||||..||.||||.|...|.
BL00108___gid 546 A-ACGGGCAAAAAAGCCATCAAAACGCTTGGAGGCAAAATTGAAACCGTA 594
BSNT_06286___ 595 CATTCTTTTAAGCTGCCTATTGAAGAAAGCGATCGTAATATTATGGTGAT 644
|||||||||.|||||||.||.|||||||||||..|.||.||.||.||.||
BL00108___gid 595 CATTCTTTTCAGCTGCCAATAGAAGAAAGCGAAAGAAACATCATTGTCAT 644
BSNT_06286___ 645 ACGCAAAATAAAAAAT-----ACACCTAAGAAGTATCCAAGAAAACCGGG 689
|||| |||.||| |||||.|||||.|.|||||||||.||.||
BL00108___gid 645 ---CAAA--AAACAATCGCAGACACCGAAGAAATTTCCAAGAAAGCCTGG 689
BSNT_06286___ 690 AACTCCTAATAAATCGCCAATTGAAGGGTAA 720
|||.|||||||||||.||.||||||||.|||
BL00108___gid 690 AACACCTAATAAATCTCCTATTGAAGGTTAA 720
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