Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06277 and BL00102
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_06277___yyaD.1.5803.seq
# -bsequence pep-align/BL00102___yyaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06277___yyaD-BL00102___yyaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06277___yyaD-BL00102___yyaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06277___yyaD
# 2: BL00102___yyaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 250/338 (74.0%)
# Similarity: 299/338 (88.5%)
# Gaps: 1/338 ( 0.3%)
# Score: 1347.0
#
#
#=======================================
BSNT_06277___ 1 MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFS 50
:|||||||||||||||||||||||||||||||.||||||:||||||..|
BL00102___yya 1 -MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLS 49
BSNT_06277___ 51 SYIVMKISFKVQSTHFLPVLEHLMGPWLAKIYDVLIIFYLFSTTMVMIAG 100
:|||||||::.:|.|||||||.|:||.|||:||||||.|||:||:|||||
BL00102___yya 50 TYIVMKISYEQKSEHFLPVLETLIGPMLAKVYDVLIILYLFTTTIVMIAG 99
BSNT_06277___ 101 GGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAGLL 150
||||||::.:|||.|:.|.|:.|..||||.:.||||:||.|||:||||||
BL00102___yya 100 GGVTLQIFHIPFWTGVILFCLCTGLLFLWGLNGILSVNSYLIPILVAGLL 149
BSNT_06277___ 151 YALISFQSTHHHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKEMK 200
|||||||:.||..|.::|:.||||||.|.|||||||||||:||:||||||
BL00102___yya 150 YALISFQTAHHQPWLLNLTHQYNWPAGIAFTSLNILSVVAVLSAVGKEMK 199
BSNT_06277___ 201 GLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIPLFAVLEGAPY 250
|:|||||||:.|||:||.||::||||||||||.|:.:||||||||||||:
BL00102___yya 200 GVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPLFAVLEGAPF 249
BSNT_06277___ 251 FLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVP 300
.:|:.||||||:||||||::.:||||||.::|::.|||:||::||.:|.|
BL00102___yya 250 PIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAP 299
BSNT_06277___ 301 FTSFGFSDLIAFLYPIYGMLNLYLLVCLLLYPILSKWK 338
|||.|||:||||||||||:|||||||.:||||||||||
BL00102___yya 300 FTSIGFSNLIAFLYPIYGLLNLYLLVNILLYPILSKWK 337
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