Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00304 and BL00096
See
DNA alignment /
Visit
BSNT_00304 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence pep-align/BSNT_00304___ybaR.1.5803.seq
# -bsequence pep-align/BL00096___ybaR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00304___ybaR-BL00096___ybaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00304___ybaR-BL00096___ybaR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00304___ybaR
# 2: BL00096___ybaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 328/490 (66.9%)
# Similarity: 391/490 (79.8%)
# Gaps: 14/490 ( 2.9%)
# Score: 1658.0
#
#
#=======================================
BSNT_00304___ 1 MNDSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYA 50
||.. .|..:||.|:|.|||:||:||||||||||.|||||||||||||||
BL00096___yba 1 MNVK-QLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYA 49
BSNT_00304___ 51 SFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGI 100
|||||::||..||||.|||||||:||::|.:||.||||.|||||||||||
BL00096___yba 50 SFCIAVVISFTGGRPAMISAATGAMALLMGTLVRDHGLDYLFAATILTGI 99
BSNT_00304___ 101 IQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYA 150
||:|.|:.||||.|||||||||:|||||||||||.||:|.|.|.|...|.
BL00096___yba 100 IQLIFGVLKIARFMKFIPRSVMVGFVNALAILIFMAQVPHFVGVSNMTYV 149
BSNT_00304___ 151 MLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNIS 200
:...:|:|||||||||.||||.|||||.||:.|:..|.|:|||||:|.:.
BL00096___yba 150 VAGITLLIIYVLPRFTKAVPSALVAIIAMTVFAIFGHFDLRTVGDLGEMK 199
BSNT_00304___ 201 SSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTD 250
.|||.|:||::||.||||.||||.:.||:.|||||||||:.|:|:||||:
BL00096___yba 200 QSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSSIVDDMTDTE 249
BSNT_00304___ 251 SDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAG 300
||||:|||||||||||.||||||||||||||||||.|:|||||||.||||
BL00096___yba 250 SDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAG 299
BSNT_00304___ 301 AFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDS 350
.||||||.||...||:||||||..||:|||:|||||||...|:|.|||||
BL00096___yba 300 VFLMFLIMVLGDWVVQIPMAALAGVMIMVSIGTFDWSSFSMLRKVPLTDS 349
BSNT_00304___ 351 IVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLR 400
|||:|||||||.|.|||||||.||:|||:|||||||||||...:|:..::
BL00096___yba 350 IVMIVTVVTVVATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVK 399
BSNT_00304___ 401 TYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKI 450
|.:|||:|||||.|..|:|...|..::|::|.:|||:||||..||:||:
BL00096___yba 400 -YIIKGQVFFASVQDFVNSFKTGEQTKKVILDFSEAHIWDDSAVAAIDKV 448
BSNT_00304___ 451 VAKFKEQGIEAELKGLNKASKSLMKQMA------------ 478
|.|.|||||:.:|.|||::|..|::::|
BL00096___yba 449 VLKMKEQGIDVDLIGLNESSWKLVEKLATYDQPHRSVSNH 488
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.