Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06023 and BL00095

See DNA alignment / Visit BSNT_06023 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_06023___yxiE.1.5803.seq
#    -bsequence pep-align/BL00095___yxiE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06023___yxiE-BL00095___yxiE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06023___yxiE-BL00095___yxiE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06023___yxiE
# 2: BL00095___yxiE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      53/155 (34.2%)
# Similarity:    86/155 (55.5%)
# Gaps:          23/155 (14.8%)
# Score: 219.5
# 
#
#=======================================

BSNT_06023___      1 MFNKMLVAIDGSDMSAKALDAAVHLAKEQQAELSILHVGREAVVTTSSLT     50
                     |:..:|:|.|||..|.:|.|.|:|||.          :..||||      
BL00095___yxi      1 MYRHILLAADGSKHSERAADHAIHLAS----------MSNEAVV------     34

BSNT_06023___     51 GIVYV-----PEHFI--DEIRNEVKKEGLKILENAKEKAAEKGVQAETIY     93
                     .::||     .:|.:  .|.|.|:::|....|.:.:.|..:..|..:...
BL00095___yxi     35 DMIYVLDYARAKHEVLHSENRTELERERRSRLLSIENKLKQAAVPYQMTM     84

BSNT_06023___     94 ANGEPAHEILNHAKEKGVSLIVVGSRGISGLKEMMLGSVSHKVSQLSTCP    143
                     .:|:|...|:::|....|.::::||||::.|:||:||||||||::...||
BL00095___yxi     85 QHGDPGPAIVSYANHHDVDIVIIGSRGLNTLQEMVLGSVSHKVAKRVKCP    134

BSNT_06023___    144 VLIVR    148
                     ||||:
BL00095___yxi    135 VLIVK    139


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.