Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06023 and BL00095
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence dna-align/BSNT_06023___yxiE.1.5803.seq
# -bsequence dna-align/BL00095___yxiE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06023___yxiE-BL00095___yxiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06023___yxiE-BL00095___yxiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06023___yxiE
# 2: BL00095___yxiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity: 256/532 (48.1%)
# Similarity: 256/532 (48.1%)
# Gaps: 197/532 (37.0%)
# Score: 523.5
#
#
#=======================================
BSNT_06023___ 1 ATGTTTA---ACAAAATGTTAGTAGCGATTGACGGATCAGACATGAGTGC 47
.|||.|| |.|.|.||.|.|..|| ||||||.|| |
BL00095___yxi 1 GTGTATAGACATATACTGCTGGCTGC---TGACGGTTC-----------C 36
BSNT_06023___ 48 AAAAGCGCTTGATGCCGCAGTGCATT-TGGCAAAAGAGC-----AACAAG 91
|| ||||| || ||||||| |.||.|
BL00095___yxi 37 AA-------------------GCATTCTG---AAAGAGCTGCCGATCATG 64
BSNT_06023___ 92 CGGAACTAAGCATTC--------TTCATGTGGGGAGA-GAAGCCGTCGTC 132
|| |||| |.||||| .|.| |||||.||||||
BL00095___yxi 65 CG---------ATTCATCTGGCTTCCATGT---CAAACGAAGCGGTCGTC 102
BSNT_06023___ 133 ACGACTTCTTCTCTGACGGGAATTGTCTATGTGCCTGAACACTTTATTG- 181
||| ||..|.|||| |||||
BL00095___yxi 103 --------------GAC----ATGATTTATG-------------TATTGG 121
BSNT_06023___ 182 ---ATGAAATCAGGAACGAG-GTTAAAAAAGAGGGCCTGAAAATCCTTGA 227
||| |||| |..|||.|.||.|.||||.|.|.| ||
BL00095___yxi 122 ATTATG----------CGAGAGCAAAACATGAAGTCCTGCATAGC---GA 158
BSNT_06023___ 228 AAA---TGCAAAA---GAA----AA------AGCAGCC-----------G 250
||| |.||.|| ||| || |||||.| |
BL00095___yxi 159 AAACCGTACAGAACTCGAACGCGAACGGCGCAGCAGGCTGCTGTCGATAG 208
BSNT_06023___ 251 AAAA-----------AGG----CGTTC-----------AAGCTGAAACCA 274
|||| ||| ||||| |.|.||.|.|
BL00095___yxi 209 AAAATAAATTAAAACAGGCGGCCGTTCCCTATCAAATGACGATGCAGC-- 256
BSNT_06023___ 275 TTTACGCGAAT---GGCGAGCCGGCGCATGAGATACTAAATC--ACGCAA 319
|||.|.|| ||| ||||| ||| |..||| ||||.|
BL00095___yxi 257 ---ACGGGGATCCGGGC---CCGGC-CAT-------TGTATCGTACGCCA 292
BSNT_06023___ 320 AAGAGAAAGGCGT---CAGCCTGATTGTAGTTGGCAGCCGGGGGATCAGC 366
|..|..|.|..|| .|.|.||||| .|.||.|||.|||||.|.|.|
BL00095___yxi 293 ACCATCATGATGTTGATATCGTGATT---ATCGGAAGCAGGGGGCTGAAC 339
BSNT_06023___ 367 GGCCTGAAAGAAATGATGCTTGGAAGCGTCAGCCATAAAGTGTCTCAATT 416
....||.|.||||||.||||.|||||.|||||||||||||||.|..||..
BL00095___yxi 340 ACTTTGCAGGAAATGGTGCTCGGAAGTGTCAGCCATAAAGTGGCGAAAAG 389
BSNT_06023___ 417 A-TCAACATGCCCGGTTTTGATTGTTCGATAG 447
| |.|| .||.||||||||.||.||...||||
BL00095___yxi 390 AGTGAA-GTGTCCGGTTTTAATCGTAAAATAG 420
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