Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06224 and BL00094

See DNA alignment / Visit BSNT_06224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:12
# Commandline: needle
#    -asequence pep-align/BSNT_06224___yybS.1.5803.seq
#    -bsequence pep-align/BL00094___yybS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06224___yybS-BL00094___yybS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06224___yybS-BL00094___yybS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06224___yybS
# 2: BL00094___yybS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     148/311 (47.6%)
# Similarity:   222/311 (71.4%)
# Gaps:           4/311 ( 1.3%)
# Score: 799.0
# 
#
#=======================================

BSNT_06224___      1 MKQTRALMEGAILISLFAIITLLVVYVPVIGTILLFALPLPMILYTIRHG     50
                     |||||||:||||::|:||::.::.:|:|.||||||..||||.::.|||||
BL00094___yyb      1 MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHG     50

BSNT_06224___     51 LKLGIWMGAVSLPVVFIVGSFNGLIVAFMSACAGIAMGHFFKRKEPGHAI    100
                     ||.||.:|.|||||..|.||..||:.|...:.||:.||.:::||||..||
BL00094___yyb     51 LKPGISVGLVSLPVSLIAGSLGGLMFAIPVSAAGVIMGFYYRRKEPAQAI    100

BSNT_06224___    101 ISGALIYMLSIVFYFVISIQFLGINIIDEAMTQYRQSLDMVETVAKQSGN    150
                     .:.|:.||:|.|...:||:||||:|:|:.|...|.::....|:..||.||
BL00094___yyb    101 AAAAVTYMVSFVLLLIISVQFLGLNLIETANQAYNETFKTFESSIKQFGN    150

BSNT_06224___    151 AGQFEKQLKLMEEQLGIVQYLFPTAIVMVGVIFSFLSYLIAKPLLRRFSP    200
                     ..:..||::|:.||....|||:|||||:...|.:||::|:|||:|||.. 
BL00094___yyb    151 DKEVAKQIELLNEQFKQAQYLYPTAIVIFSGITAFLNHLLAKPVLRRII-    199

BSNT_06224___    201 DIPNLKPFRELKFPQSVVVLYLIIVMLSFLPLEKGQMLYSIALNGEFILG    250
                     .||:|||||:::.|||::.:||:.::||..|:|:|.:.||:.||...|:|
BL00094___yyb    200 QIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSVLLNASLIMG    249

BSNT_06224___    251 FLIFIQGLSFIFFYCHKKQYPKAAAVIAVILGFVHPVFMAAIRILGVLDM    300
                     |::.|||.||:|::||.|:.|....|:.:|:|...|: :..:||||::|:
BL00094___yyb    250 FVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPL-LYLVRILGIIDI    298

BSNT_06224___    301 GFHIRNKVK--    309
                     ||::|.:||  
BL00094___yyb    299 GFNLRERVKKS    309


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