Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_06278 and BL00091

See DNA alignment / Visit BSNT_06278 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence pep-align/BSNT_06278___yyaC.1.5803.seq
#    -bsequence pep-align/BL00091___yyaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06278___yyaC-BL00091___yyaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06278___yyaC-BL00091___yyaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06278___yyaC
# 2: BL00091___yyaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity:     146/206 (70.9%)
# Similarity:   178/206 (86.4%)
# Gaps:           2/206 ( 1.0%)
# Score: 779.0
# 
#
#=======================================

BSNT_06278___      1 MNRKGGLFSSQERVKQYVSHTDAAAAKQIQTILSSSLRKAAGKPIVVVCI     50
                     ||||||:| |||.:.:|:||||..|.|||:.:||..|::|..:|||:|||
BL00091___yya      1 MNRKGGIF-SQEPMNEYISHTDPLAVKQIEKVLSVYLKEAGDRPIVIVCI     49

BSNT_06278___     51 GTDRSTGDSLGPLVGMKLKQMQLTRFHVYGTLSDPVHAVNMKDKINDIHK    100
                     ||||||||||||||||||...|||||||||||:|||||||:.:|::.||:
BL00091___yya     50 GTDRSTGDSLGPLVGMKLSAKQLTRFHVYGTLADPVHAVNLNEKLDHIHQ     99

BSNT_06278___    101 LHKNPFVIAVDACLGRVKSVGSFQIGDGPLKPGAGVQKDLPEVGDLHING    150
                     .|:|||:||:||||||.|||||||||.|||||||||||.|||||.:||||
BL00091___yya    100 QHQNPFMIAIDACLGRTKSVGSFQIGKGPLKPGAGVQKSLPEVGHVHING    149

BSNT_06278___    151 IVNVSGFMEYFVLQNTRLNLVMNMANVLAEGLSLTDRTEWRQERLNPLQR    200
                     ||||||||||||||||||||||:||||||:|||..::|..::..::|::|
BL00091___yya    150 IVNVSGFMEYFVLQNTRLNLVMSMANVLADGLSHLEKTGSQRRHVSPIER    199

BSNT_06278___    201 LTGRI-    205
                     :|||: 
BL00091___yya    200 MTGRMS    205


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.