Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06278 and BL00091
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_06278___yyaC.1.5803.seq
# -bsequence dna-align/BL00091___yyaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06278___yyaC-BL00091___yyaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06278___yyaC-BL00091___yyaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06278___yyaC
# 2: BL00091___yyaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 446/659 (67.7%)
# Similarity: 446/659 (67.7%)
# Gaps: 82/659 (12.4%)
# Score: 1399.0
#
#
#=======================================
BSNT_06278___ 1 ATGAATCGAAAAGGCGGGCTTTTTTCCTCTCAGGAACGAGTAAAGCAATA 50
|||||||||||||||||..||||| |||||.||||.|.|.||..||||
BL00091___yya 1 ATGAATCGAAAAGGCGGAATTTTT---TCTCAAGAACCAATGAATGAATA 47
BSNT_06278___ 51 TGTTTCACATACAGAT--GCTGCAGCGGCAAAACAAATCCAAACCATCCT 98
|.||||.|||||.||| ||| |||.|..||||||||..|.|...||||
BL00091___yya 48 TATTTCTCATACGGATCCGCT--AGCTGTTAAACAAATAGAGAAAGTCCT 95
BSNT_06278___ 99 TTCTTCATCCTTACGTAAAG-----CTG---CCGGCAAACCAATTGTCGT 140
||| |.|| ||..||||| |.| ||||| ||| ||||
BL00091___yya 96 TTC--CGTC--TATTTAAAGGAAGCCGGAGACCGGC---CCA----TCGT 134
BSNT_06278___ 141 G---GTTTGTATCGGAACAGACCGTTCAACCGGTGACTCATTAGGCCCGC 187
| |||||.|||||.||||||||.||.|||||.||.||..|.||.||.|
BL00091___yya 135 GATCGTTTGCATCGGTACAGACCGCTCGACCGGAGATTCGCTCGGTCCCC 184
BSNT_06278___ 188 TCGTAGGGATGAAACT-----CAAACAGATGCAGCTCACCAGATTCCATG 232
|||||||.|||||||| |||| ||||||.||..|.||.||||
BL00091___yya 185 TCGTAGGAATGAAACTCTCCGCAAA-----GCAGCTGACACGTTTTCATG 229
BSNT_06278___ 233 TCTACGGAAC-CTTATCTGACCCCGTCCATGCTGTGAACATGAAGGATAA 281
||||.||||| ||| .|.|||||.||.||.||.||||||.|.||.||.||
BL00091___yya 230 TCTATGGAACGCTT-GCCGACCCGGTTCACGCCGTGAACTTAAATGAAAA 278
BSNT_06278___ 282 AATCAATGACATTCATAAATTACATAAAAACCCATTTGTTATAGCGGTGG 331
..|..||.|.||||||.|....|||.||||.||.|||.|.||.|||.|.|
BL00091___yya 279 GCTTGATCATATTCATCAGCAGCATCAAAATCCTTTTATGATCGCGATCG 328
BSNT_06278___ 332 ATGCATG-CTTAGGCCGCGTTAAGAGTGTGGGTTCATTTCAAATCGGGGA 380
|.||.|| ||| ||.||....||.||.|||||.||.||.||||||||..|
BL00091___yya 329 ACGCCTGTCTT-GGACGAACCAAAAGCGTGGGGTCTTTCCAAATCGGCAA 377
BSNT_06278___ 381 CGGGCCATTAAAGCCCGGAGCCGGTGTGCA-AAAAGACCTT--CCTGAAG 427
.|||||.||.|||||.|||||.||.||.|| ||||| || ||.||||
BL00091___yya 378 AGGGCCTTTGAAGCCGGGAGCAGGCGTTCAGAAAAG---TTTGCCGGAAG 424
BSNT_06278___ 428 TGGGAGATCTTCATATTAACGGAATCGTAAATGTCAGCGGTTTTATGGAA 477
|.||..|..|.||||||||||||||.||.||||||||||||||||||||.
BL00091___yya 425 TCGGCCACGTGCATATTAACGGAATTGTCAATGTCAGCGGTTTTATGGAG 474
BSNT_06278___ 478 TATTTTGTATTACAAAATACTAGACTCAA-CTTGGTCATGAATATGGCAA 526
||||||||..|.||||||||.||.||||| ||| |||||||..|||||||
BL00091___yya 475 TATTTTGTCCTGCAAAATACAAGGCTCAATCTT-GTCATGAGCATGGCAA 523
BSNT_06278___ 527 ATGTTCTAGCGGAAGG---------TTTGAGTTTAACAGATCGGA-CAGA 566
||||.||.|||||.|| |.|| .||.|||.|||| |..|
BL00091___yya 524 ATGTGCTTGCGGACGGGCTGTCGCATCTG----GAAAAGACCGGATCGCA 569
BSNT_06278___ 567 GTGGAGGCAAGAACGCC----TTAACCCGCTGCAAAGGCTCACTGGGCGC 612
|.|| |||| .|.|||...|| ||||..|.||.||..|.
BL00091___yya 570 GCGG---------CGCCATGTGTCACCAATTG-AAAGAATGACCGGAAGA 609
BSNT_06278___ 613 AT---ATAA 618
|| ||||
BL00091___yya 610 ATGTCATAA 618
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