Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06229 and BL00089

See DNA alignment / Visit BSNT_06229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:12
# Commandline: needle
#    -asequence pep-align/BSNT_06229.1.5803.seq
#    -bsequence pep-align/BL00089___cotF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06229-BL00089___cotF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06229-BL00089___cotF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: BL00089___cotF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:      69/161 (42.9%)
# Similarity:    84/161 (52.2%)
# Gaps:          59/161 (36.6%)
# Score: 331.5
# 
#
#=======================================

BSNT_06229         0 --------------------------------------------------      0
                                                                       
BL00089___cot      1 MTTKTLAWHETLELHELIAAQSVGLVKIKKSMKKISDPQLRQLYSVSAKA     50

BSNT_06229         1 ----MRELLPFFPQAP--HREDEEEERADNPFYSGDLLGFAKTSVRSYAI     44
                         :||||||.|:||  .|||   ||||..|.:||||..|||:||:|||
BL00089___cot     51 LEQNLRELLPFLPKAPAFQRED---ERADLYFDAGDLLVLAKTTVRNYAI     97

BSNT_06229        45 AITETATPQLRNVLVKQLNAAIQLHAHVYRYMYQHGYYPSYNLSELLKND     94
                     ||||||||:||.|||||:||||:||..|:.:|||.|.||:|||.:|||.|
BL00089___cot     98 AITETATPELRRVLVKQINAAIKLHEQVFYFMYQRGLYPAYNLVDLLKGD    147

BSNT_06229        95 VRNANRAISMK    105
                     ..:|.:||||:
BL00089___cot    148 AMHAQKAISMR    158


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