Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06229 and BL00089
See
Amino acid alignment /
Visit
BSNT_06229 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_06229.1.5803.seq
# -bsequence dna-align/BL00089___cotF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06229-BL00089___cotF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06229-BL00089___cotF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: BL00089___cotF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity: 213/492 (43.3%)
# Similarity: 213/492 (43.3%)
# Gaps: 189/492 (38.4%)
# Score: 577.5
#
#
#=======================================
BSNT_06229 0 -------------------------------------------------- 0
BL00089___cot 1 ATGACAACAAAAACATTGGCTTGGCATGAAACGTTGGAGTTGCATGAACT 50
BSNT_06229 0 -------------------------------------------------- 0
BL00089___cot 51 AATCGCGGCACAGTCTGTCGGATTGGTGAAGATCAAGAAAAGCATGAAGA 100
BSNT_06229 0 -------------------------------------------------- 0
BL00089___cot 101 AAATCAGCGACCCTCAGTTAAGACAGCTTTACAGCGTGTCAGCAAAAGCA 150
BSNT_06229 1 ------------TTGAGAGAGCTTCTTCCGTTCTTTCCACAGGCTCC-GC 37
||.||||||||||||||.||.||.|||.|.||||| ||
BL00089___cot 151 TTGGAGCAAAATTTAAGAGAGCTTCTTCCCTTTTTGCCAAAAGCTCCAGC 200
BSNT_06229 38 A---CAGAGAAGATGAGGAAGAAGAACGCGCAGATAACCC----ATTTTA 80
| |||.| |||.||.|||||.||.|| | |||||.
BL00089___cot 201 ATTTCAGCG-------GGAGGATGAACGGGCTGA-----CTTGTATTTTG 238
BSNT_06229 81 CAGC-GGTGACCTGCTCGGT-TTTGCTAAAACATCTGTCCGCAGCTATGC 128
..|| |||||.||| |.||| .|.||.|||||..|.||.||.|.||||||
BL00089___cot 239 ATGCGGGTGATCTG-TTGGTGCTGGCGAAAACGACCGTTCGAAACTATGC 287
BSNT_06229 129 CATCGCAATTACAGAAACAGCAACACCTCAATTAAGAAACGTACTGGTCA 178
.||.||.||.||.|||||.||.||.||..|..|.||.|..||.||.||.|
BL00089___cot 288 GATTGCGATCACGGAAACGGCGACGCCCGAGCTCAGGAGAGTGCTTGTTA 337
BSNT_06229 179 AACAGCTGAATGCTGCCATCCAGCTGCACGCCCATGTTTATCGATACATG 228
||||..|.|||||.|||||..||.||||.|..||.||||.|...|..|||
BL00089___cot 338 AACAAATCAATGCGGCCATTAAGTTGCATGAACAAGTTTTTTATTTTATG 387
BSNT_06229 229 TATCAGCATGGATATTATCCGTCTTACAACCT-TTCTGAACTGTTGAAAA 277
||.||....||.|..|||||..|.||.||||| .|| ||.|||.|.|||.
BL00089___cot 388 TACCAAAGAGGCTTATATCCCGCCTATAACCTCGTC-GACCTGCTAAAAG 436
BSNT_06229 278 ACGATGTCAGAAACGC-CAACAGAGCCATTTCAATGAAATAA 318
.|||.|.||...|.|| ||| |.|||.||.||.||||.||||
BL00089___cot 437 GCGACGCCATGCATGCGCAA-AAAGCGATATCGATGAGATAA 477
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.